Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32812 | 98659;98660;98661 | chr2:178539631;178539630;178539629 | chr2:179404358;179404357;179404356 |
N2AB | 31171 | 93736;93737;93738 | chr2:178539631;178539630;178539629 | chr2:179404358;179404357;179404356 |
N2A | 30244 | 90955;90956;90957 | chr2:178539631;178539630;178539629 | chr2:179404358;179404357;179404356 |
N2B | 23747 | 71464;71465;71466 | chr2:178539631;178539630;178539629 | chr2:179404358;179404357;179404356 |
Novex-1 | 23872 | 71839;71840;71841 | chr2:178539631;178539630;178539629 | chr2:179404358;179404357;179404356 |
Novex-2 | 23939 | 72040;72041;72042 | chr2:178539631;178539630;178539629 | chr2:179404358;179404357;179404356 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.999 | D | 0.773 | 0.541 | 0.477685322099 | gnomAD-4.0.0 | 8.40225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1834 | likely_benign | 0.1628 | benign | -0.911 | Destabilizing | 0.987 | D | 0.441 | neutral | N | 0.483710411 | None | None | N |
S/C | 0.2578 | likely_benign | 0.2278 | benign | -1.029 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | N | 0.496271712 | None | None | N |
S/D | 0.892 | likely_pathogenic | 0.8635 | pathogenic | -1.86 | Destabilizing | 1.0 | D | 0.589 | neutral | None | None | None | None | N |
S/E | 0.8725 | likely_pathogenic | 0.855 | pathogenic | -1.725 | Destabilizing | 0.999 | D | 0.528 | neutral | None | None | None | None | N |
S/F | 0.6699 | likely_pathogenic | 0.5959 | pathogenic | -0.767 | Destabilizing | 0.997 | D | 0.775 | deleterious | N | 0.501284915 | None | None | N |
S/G | 0.289 | likely_benign | 0.2429 | benign | -1.228 | Destabilizing | 0.999 | D | 0.447 | neutral | None | None | None | None | N |
S/H | 0.7145 | likely_pathogenic | 0.6714 | pathogenic | -1.532 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
S/I | 0.7575 | likely_pathogenic | 0.6993 | pathogenic | -0.131 | Destabilizing | 0.995 | D | 0.724 | prob.delet. | None | None | None | None | N |
S/K | 0.9681 | likely_pathogenic | 0.9538 | pathogenic | -0.795 | Destabilizing | 0.999 | D | 0.525 | neutral | None | None | None | None | N |
S/L | 0.4498 | ambiguous | 0.3753 | ambiguous | -0.131 | Destabilizing | 0.269 | N | 0.481 | neutral | None | None | None | None | N |
S/M | 0.5259 | ambiguous | 0.4749 | ambiguous | -0.213 | Destabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | N |
S/N | 0.4763 | ambiguous | 0.4067 | ambiguous | -1.32 | Destabilizing | 1.0 | D | 0.571 | neutral | None | None | None | None | N |
S/P | 0.9937 | likely_pathogenic | 0.9904 | pathogenic | -0.359 | Destabilizing | 0.999 | D | 0.773 | deleterious | D | 0.543583038 | None | None | N |
S/Q | 0.8245 | likely_pathogenic | 0.7972 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
S/R | 0.9418 | likely_pathogenic | 0.922 | pathogenic | -0.889 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
S/T | 0.189 | likely_benign | 0.1648 | benign | -1.02 | Destabilizing | 0.994 | D | 0.468 | neutral | N | 0.506133941 | None | None | N |
S/V | 0.6621 | likely_pathogenic | 0.6003 | pathogenic | -0.359 | Destabilizing | 0.983 | D | 0.674 | neutral | None | None | None | None | N |
S/W | 0.7547 | likely_pathogenic | 0.7078 | pathogenic | -0.982 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
S/Y | 0.5474 | ambiguous | 0.4818 | ambiguous | -0.592 | Destabilizing | 0.999 | D | 0.785 | deleterious | N | 0.520508747 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.