Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32813 | 98662;98663;98664 | chr2:178539628;178539627;178539626 | chr2:179404355;179404354;179404353 |
N2AB | 31172 | 93739;93740;93741 | chr2:178539628;178539627;178539626 | chr2:179404355;179404354;179404353 |
N2A | 30245 | 90958;90959;90960 | chr2:178539628;178539627;178539626 | chr2:179404355;179404354;179404353 |
N2B | 23748 | 71467;71468;71469 | chr2:178539628;178539627;178539626 | chr2:179404355;179404354;179404353 |
Novex-1 | 23873 | 71842;71843;71844 | chr2:178539628;178539627;178539626 | chr2:179404355;179404354;179404353 |
Novex-2 | 23940 | 72043;72044;72045 | chr2:178539628;178539627;178539626 | chr2:179404355;179404354;179404353 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.948 | N | 0.382 | 0.186 | 0.336892272479 | gnomAD-4.0.0 | 6.84202E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99454E-07 | 0 | 0 |
V/M | rs1693400485 | None | 0.948 | N | 0.45 | 0.198 | 0.369867359543 | gnomAD-4.0.0 | 2.05261E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69836E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.617 | likely_pathogenic | 0.5614 | ambiguous | -2.651 | Highly Destabilizing | 0.989 | D | 0.625 | neutral | N | 0.497153806 | None | None | N |
V/C | 0.8785 | likely_pathogenic | 0.8585 | pathogenic | -2.143 | Highly Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
V/D | 0.9971 | likely_pathogenic | 0.9959 | pathogenic | -3.471 | Highly Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
V/E | 0.9882 | likely_pathogenic | 0.9853 | pathogenic | -3.156 | Highly Destabilizing | 0.999 | D | 0.799 | deleterious | N | 0.515710234 | None | None | N |
V/F | 0.77 | likely_pathogenic | 0.7197 | pathogenic | -1.474 | Destabilizing | 0.998 | D | 0.788 | deleterious | None | None | None | None | N |
V/G | 0.8532 | likely_pathogenic | 0.8242 | pathogenic | -3.243 | Highly Destabilizing | 0.998 | D | 0.819 | deleterious | N | 0.504353928 | None | None | N |
V/H | 0.9959 | likely_pathogenic | 0.9938 | pathogenic | -3.041 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
V/I | 0.1156 | likely_benign | 0.1056 | benign | -0.919 | Destabilizing | 0.611 | D | 0.278 | neutral | None | None | None | None | N |
V/K | 0.9891 | likely_pathogenic | 0.9864 | pathogenic | -2.083 | Highly Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
V/L | 0.41 | ambiguous | 0.3654 | ambiguous | -0.919 | Destabilizing | 0.948 | D | 0.382 | neutral | N | 0.474738306 | None | None | N |
V/M | 0.5173 | ambiguous | 0.4305 | ambiguous | -1.278 | Destabilizing | 0.948 | D | 0.45 | neutral | N | 0.472644938 | None | None | N |
V/N | 0.9883 | likely_pathogenic | 0.9829 | pathogenic | -2.748 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/P | 0.9961 | likely_pathogenic | 0.9945 | pathogenic | -1.479 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
V/Q | 0.9789 | likely_pathogenic | 0.9739 | pathogenic | -2.387 | Highly Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
V/R | 0.9761 | likely_pathogenic | 0.9717 | pathogenic | -2.137 | Highly Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
V/S | 0.9248 | likely_pathogenic | 0.8962 | pathogenic | -3.261 | Highly Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
V/T | 0.8155 | likely_pathogenic | 0.7678 | pathogenic | -2.792 | Highly Destabilizing | 0.996 | D | 0.674 | neutral | None | None | None | None | N |
V/W | 0.9963 | likely_pathogenic | 0.9948 | pathogenic | -1.999 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
V/Y | 0.9809 | likely_pathogenic | 0.975 | pathogenic | -1.753 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.