Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32826 | 98701;98702;98703 | chr2:178539589;178539588;178539587 | chr2:179404316;179404315;179404314 |
N2AB | 31185 | 93778;93779;93780 | chr2:178539589;178539588;178539587 | chr2:179404316;179404315;179404314 |
N2A | 30258 | 90997;90998;90999 | chr2:178539589;178539588;178539587 | chr2:179404316;179404315;179404314 |
N2B | 23761 | 71506;71507;71508 | chr2:178539589;178539588;178539587 | chr2:179404316;179404315;179404314 |
Novex-1 | 23886 | 71881;71882;71883 | chr2:178539589;178539588;178539587 | chr2:179404316;179404315;179404314 |
Novex-2 | 23953 | 72082;72083;72084 | chr2:178539589;178539588;178539587 | chr2:179404316;179404315;179404314 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.885 | N | 0.662 | 0.165 | 0.353548585375 | gnomAD-4.0.0 | 1.09469E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.43912E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3904 | ambiguous | 0.3358 | benign | -0.835 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | I |
A/D | 0.4796 | ambiguous | 0.4179 | ambiguous | -0.877 | Destabilizing | 0.982 | D | 0.715 | prob.delet. | N | 0.50280006 | None | None | I |
A/E | 0.4937 | ambiguous | 0.4355 | ambiguous | -0.955 | Destabilizing | 0.953 | D | 0.709 | prob.delet. | None | None | None | None | I |
A/F | 0.5318 | ambiguous | 0.4747 | ambiguous | -1.164 | Destabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | I |
A/G | 0.2268 | likely_benign | 0.1773 | benign | -1.065 | Destabilizing | 0.76 | D | 0.643 | neutral | N | 0.448922716 | None | None | I |
A/H | 0.6572 | likely_pathogenic | 0.5956 | pathogenic | -1.166 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
A/I | 0.5566 | ambiguous | 0.4814 | ambiguous | -0.492 | Destabilizing | 0.993 | D | 0.703 | prob.neutral | None | None | None | None | I |
A/K | 0.7847 | likely_pathogenic | 0.7365 | pathogenic | -1.007 | Destabilizing | 0.953 | D | 0.705 | prob.neutral | None | None | None | None | I |
A/L | 0.3394 | likely_benign | 0.287 | benign | -0.492 | Destabilizing | 0.953 | D | 0.698 | prob.neutral | None | None | None | None | I |
A/M | 0.3455 | ambiguous | 0.2876 | benign | -0.342 | Destabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | I |
A/N | 0.4353 | ambiguous | 0.3611 | ambiguous | -0.645 | Destabilizing | 0.986 | D | 0.712 | prob.delet. | None | None | None | None | I |
A/P | 0.9721 | likely_pathogenic | 0.9613 | pathogenic | -0.577 | Destabilizing | 0.991 | D | 0.703 | prob.neutral | N | 0.475776557 | None | None | I |
A/Q | 0.5466 | ambiguous | 0.4923 | ambiguous | -0.873 | Destabilizing | 0.993 | D | 0.703 | prob.neutral | None | None | None | None | I |
A/R | 0.7049 | likely_pathogenic | 0.6762 | pathogenic | -0.607 | Destabilizing | 0.986 | D | 0.709 | prob.delet. | None | None | None | None | I |
A/S | 0.0835 | likely_benign | 0.0703 | benign | -0.991 | Destabilizing | 0.079 | N | 0.425 | neutral | N | 0.353284468 | None | None | I |
A/T | 0.1193 | likely_benign | 0.0964 | benign | -0.978 | Destabilizing | 0.885 | D | 0.662 | neutral | N | 0.483926298 | None | None | I |
A/V | 0.2672 | likely_benign | 0.218 | benign | -0.577 | Destabilizing | 0.939 | D | 0.721 | prob.delet. | N | 0.501357265 | None | None | I |
A/W | 0.8638 | likely_pathogenic | 0.8251 | pathogenic | -1.4 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
A/Y | 0.667 | likely_pathogenic | 0.6049 | pathogenic | -1.028 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.