Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32827 | 98704;98705;98706 | chr2:178539586;178539585;178539584 | chr2:179404313;179404312;179404311 |
N2AB | 31186 | 93781;93782;93783 | chr2:178539586;178539585;178539584 | chr2:179404313;179404312;179404311 |
N2A | 30259 | 91000;91001;91002 | chr2:178539586;178539585;178539584 | chr2:179404313;179404312;179404311 |
N2B | 23762 | 71509;71510;71511 | chr2:178539586;178539585;178539584 | chr2:179404313;179404312;179404311 |
Novex-1 | 23887 | 71884;71885;71886 | chr2:178539586;178539585;178539584 | chr2:179404313;179404312;179404311 |
Novex-2 | 23954 | 72085;72086;72087 | chr2:178539586;178539585;178539584 | chr2:179404313;179404312;179404311 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs780460404 | -0.199 | 1.0 | N | 0.665 | 0.463 | 0.201204373187 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 5.79E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
D/G | rs780460404 | -0.199 | 1.0 | N | 0.665 | 0.463 | 0.201204373187 | gnomAD-4.0.0 | 4.77327E-06 | None | None | None | None | N | None | 0 | 4.57268E-05 | None | 0 | 0 | None | 0 | 0 | 2.85802E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1518 | likely_benign | 0.1721 | benign | -0.171 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | N | 0.390407556 | None | None | N |
D/C | 0.6778 | likely_pathogenic | 0.6909 | pathogenic | 0.039 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
D/E | 0.1322 | likely_benign | 0.1377 | benign | -0.256 | Destabilizing | 1.0 | D | 0.402 | neutral | N | 0.34728871 | None | None | N |
D/F | 0.6792 | likely_pathogenic | 0.7183 | pathogenic | -0.131 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
D/G | 0.1912 | likely_benign | 0.215 | benign | -0.366 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.436198561 | None | None | N |
D/H | 0.3203 | likely_benign | 0.3569 | ambiguous | 0.048 | Stabilizing | 1.0 | D | 0.593 | neutral | N | 0.486723382 | None | None | N |
D/I | 0.4302 | ambiguous | 0.4701 | ambiguous | 0.292 | Stabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
D/K | 0.3227 | likely_benign | 0.3657 | ambiguous | 0.301 | Stabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
D/L | 0.4212 | ambiguous | 0.4561 | ambiguous | 0.292 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
D/M | 0.6256 | likely_pathogenic | 0.6569 | pathogenic | 0.353 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
D/N | 0.1146 | likely_benign | 0.1204 | benign | 0.069 | Stabilizing | 1.0 | D | 0.641 | neutral | N | 0.464499883 | None | None | N |
D/P | 0.3989 | ambiguous | 0.4439 | ambiguous | 0.16 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
D/Q | 0.3005 | likely_benign | 0.3297 | benign | 0.1 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
D/R | 0.3687 | ambiguous | 0.4215 | ambiguous | 0.481 | Stabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
D/S | 0.1354 | likely_benign | 0.1466 | benign | -0.059 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
D/T | 0.2711 | likely_benign | 0.3 | benign | 0.09 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
D/V | 0.2371 | likely_benign | 0.263 | benign | 0.16 | Stabilizing | 1.0 | D | 0.662 | neutral | N | 0.471273927 | None | None | N |
D/W | 0.9043 | likely_pathogenic | 0.9187 | pathogenic | -0.028 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
D/Y | 0.3102 | likely_benign | 0.3324 | benign | 0.102 | Stabilizing | 1.0 | D | 0.597 | neutral | N | 0.487070099 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.