Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32841 | 98746;98747;98748 | chr2:178539544;178539543;178539542 | chr2:179404271;179404270;179404269 |
N2AB | 31200 | 93823;93824;93825 | chr2:178539544;178539543;178539542 | chr2:179404271;179404270;179404269 |
N2A | 30273 | 91042;91043;91044 | chr2:178539544;178539543;178539542 | chr2:179404271;179404270;179404269 |
N2B | 23776 | 71551;71552;71553 | chr2:178539544;178539543;178539542 | chr2:179404271;179404270;179404269 |
Novex-1 | 23901 | 71926;71927;71928 | chr2:178539544;178539543;178539542 | chr2:179404271;179404270;179404269 |
Novex-2 | 23968 | 72127;72128;72129 | chr2:178539544;178539543;178539542 | chr2:179404271;179404270;179404269 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | None | N | 0.181 | 0.043 | 0.167679373172 | gnomAD-4.0.0 | 6.84185E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99462E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5855 | likely_pathogenic | 0.5168 | ambiguous | -0.768 | Destabilizing | 0.824 | D | 0.318 | neutral | None | None | None | None | N |
A/D | 0.4129 | ambiguous | 0.312 | benign | -0.465 | Destabilizing | 0.062 | N | 0.355 | neutral | N | 0.380433784 | None | None | N |
A/E | 0.3194 | likely_benign | 0.2578 | benign | -0.588 | Destabilizing | 0.081 | N | 0.285 | neutral | None | None | None | None | N |
A/F | 0.4703 | ambiguous | 0.3974 | ambiguous | -0.787 | Destabilizing | 0.555 | D | 0.421 | neutral | None | None | None | None | N |
A/G | 0.1692 | likely_benign | 0.142 | benign | -0.364 | Destabilizing | 0.027 | N | 0.321 | neutral | N | 0.369693928 | None | None | N |
A/H | 0.5407 | ambiguous | 0.474 | ambiguous | -0.269 | Destabilizing | 0.824 | D | 0.431 | neutral | None | None | None | None | N |
A/I | 0.3184 | likely_benign | 0.2465 | benign | -0.277 | Destabilizing | 0.235 | N | 0.329 | neutral | None | None | None | None | N |
A/K | 0.4562 | ambiguous | 0.4061 | ambiguous | -0.659 | Destabilizing | 0.081 | N | 0.309 | neutral | None | None | None | None | N |
A/L | 0.2098 | likely_benign | 0.1716 | benign | -0.277 | Destabilizing | 0.081 | N | 0.272 | neutral | None | None | None | None | N |
A/M | 0.2345 | likely_benign | 0.1926 | benign | -0.53 | Destabilizing | 0.824 | D | 0.344 | neutral | None | None | None | None | N |
A/N | 0.2429 | likely_benign | 0.1949 | benign | -0.345 | Destabilizing | 0.002 | N | 0.291 | neutral | None | None | None | None | N |
A/P | 0.2587 | likely_benign | 0.2039 | benign | -0.249 | Destabilizing | 0.317 | N | 0.332 | neutral | N | 0.475632102 | None | None | N |
A/Q | 0.34 | ambiguous | 0.3074 | benign | -0.574 | Destabilizing | 0.38 | N | 0.333 | neutral | None | None | None | None | N |
A/R | 0.3948 | ambiguous | 0.3673 | ambiguous | -0.216 | Destabilizing | 0.38 | N | 0.328 | neutral | None | None | None | None | N |
A/S | 0.1114 | likely_benign | 0.0956 | benign | -0.565 | Destabilizing | None | N | 0.253 | neutral | N | 0.42949438 | None | None | N |
A/T | 0.1048 | likely_benign | 0.0773 | benign | -0.603 | Destabilizing | None | N | 0.181 | neutral | N | 0.435150916 | None | None | N |
A/V | 0.1578 | likely_benign | 0.1217 | benign | -0.249 | Destabilizing | 0.062 | N | 0.281 | neutral | N | 0.468706129 | None | None | N |
A/W | 0.7759 | likely_pathogenic | 0.7371 | pathogenic | -0.941 | Destabilizing | 0.935 | D | 0.554 | neutral | None | None | None | None | N |
A/Y | 0.5442 | ambiguous | 0.4907 | ambiguous | -0.593 | Destabilizing | 0.555 | D | 0.423 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.