Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32845 | 98758;98759;98760 | chr2:178539532;178539531;178539530 | chr2:179404259;179404258;179404257 |
N2AB | 31204 | 93835;93836;93837 | chr2:178539532;178539531;178539530 | chr2:179404259;179404258;179404257 |
N2A | 30277 | 91054;91055;91056 | chr2:178539532;178539531;178539530 | chr2:179404259;179404258;179404257 |
N2B | 23780 | 71563;71564;71565 | chr2:178539532;178539531;178539530 | chr2:179404259;179404258;179404257 |
Novex-1 | 23905 | 71938;71939;71940 | chr2:178539532;178539531;178539530 | chr2:179404259;179404258;179404257 |
Novex-2 | 23972 | 72139;72140;72141 | chr2:178539532;178539531;178539530 | chr2:179404259;179404258;179404257 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1230480423 | 0.114 | 1.0 | N | 0.782 | 0.463 | 0.551634222746 | gnomAD-4.0.0 | 2.73676E-06 | None | None | None | None | I | None | 0 | 2.23604E-05 | None | 0 | 0 | None | 0 | 0 | 2.6984E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1889 | likely_benign | 0.1428 | benign | -0.733 | Destabilizing | 0.999 | D | 0.549 | neutral | D | 0.524695485 | None | None | I |
T/C | 0.6634 | likely_pathogenic | 0.5556 | ambiguous | -0.49 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
T/D | 0.8627 | likely_pathogenic | 0.7611 | pathogenic | -0.081 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
T/E | 0.7428 | likely_pathogenic | 0.615 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
T/F | 0.7616 | likely_pathogenic | 0.6288 | pathogenic | -0.788 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
T/G | 0.6221 | likely_pathogenic | 0.5386 | ambiguous | -0.982 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
T/H | 0.6768 | likely_pathogenic | 0.5518 | ambiguous | -1.202 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
T/I | 0.4107 | ambiguous | 0.2954 | benign | -0.165 | Destabilizing | 1.0 | D | 0.782 | deleterious | N | 0.471257107 | None | None | I |
T/K | 0.5479 | ambiguous | 0.4222 | ambiguous | -0.741 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
T/L | 0.2495 | likely_benign | 0.1816 | benign | -0.165 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | I |
T/M | 0.2003 | likely_benign | 0.1509 | benign | 0.012 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
T/N | 0.3961 | ambiguous | 0.2841 | benign | -0.641 | Destabilizing | 1.0 | D | 0.748 | deleterious | N | 0.521463179 | None | None | I |
T/P | 0.2559 | likely_benign | 0.1792 | benign | -0.322 | Destabilizing | 1.0 | D | 0.782 | deleterious | N | 0.462993665 | None | None | I |
T/Q | 0.5275 | ambiguous | 0.4164 | ambiguous | -0.79 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
T/R | 0.4706 | ambiguous | 0.3441 | ambiguous | -0.482 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
T/S | 0.3138 | likely_benign | 0.241 | benign | -0.92 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.521500464 | None | None | I |
T/V | 0.2675 | likely_benign | 0.2038 | benign | -0.322 | Destabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | I |
T/W | 0.9231 | likely_pathogenic | 0.8718 | pathogenic | -0.732 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
T/Y | 0.7731 | likely_pathogenic | 0.6466 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.