Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32857 | 98794;98795;98796 | chr2:178539496;178539495;178539494 | chr2:179404223;179404222;179404221 |
N2AB | 31216 | 93871;93872;93873 | chr2:178539496;178539495;178539494 | chr2:179404223;179404222;179404221 |
N2A | 30289 | 91090;91091;91092 | chr2:178539496;178539495;178539494 | chr2:179404223;179404222;179404221 |
N2B | 23792 | 71599;71600;71601 | chr2:178539496;178539495;178539494 | chr2:179404223;179404222;179404221 |
Novex-1 | 23917 | 71974;71975;71976 | chr2:178539496;178539495;178539494 | chr2:179404223;179404222;179404221 |
Novex-2 | 23984 | 72175;72176;72177 | chr2:178539496;178539495;178539494 | chr2:179404223;179404222;179404221 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1472412628 | 0.185 | 0.997 | N | 0.548 | 0.233 | 0.555827534791 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1472412628 | 0.185 | 0.997 | N | 0.548 | 0.233 | 0.555827534791 | gnomAD-4.0.0 | 1.59115E-06 | None | None | None | None | N | None | 5.65483E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7076 | likely_pathogenic | 0.5797 | pathogenic | -1.667 | Destabilizing | 0.999 | D | 0.653 | neutral | D | 0.527202646 | None | None | N |
V/C | 0.935 | likely_pathogenic | 0.9079 | pathogenic | -1.265 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
V/D | 0.9938 | likely_pathogenic | 0.9902 | pathogenic | -1.955 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
V/E | 0.9753 | likely_pathogenic | 0.9634 | pathogenic | -1.695 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.535047435 | None | None | N |
V/F | 0.769 | likely_pathogenic | 0.6486 | pathogenic | -0.941 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
V/G | 0.8811 | likely_pathogenic | 0.8268 | pathogenic | -2.225 | Highly Destabilizing | 1.0 | D | 0.818 | deleterious | D | 0.535047435 | None | None | N |
V/H | 0.9929 | likely_pathogenic | 0.9885 | pathogenic | -1.962 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
V/I | 0.1279 | likely_benign | 0.1183 | benign | -0.103 | Destabilizing | 0.997 | D | 0.548 | neutral | N | 0.480907422 | None | None | N |
V/K | 0.9838 | likely_pathogenic | 0.9768 | pathogenic | -1.365 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
V/L | 0.6291 | likely_pathogenic | 0.4946 | ambiguous | -0.103 | Destabilizing | 0.997 | D | 0.661 | neutral | N | 0.52107639 | None | None | N |
V/M | 0.684 | likely_pathogenic | 0.5518 | ambiguous | -0.246 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
V/N | 0.9825 | likely_pathogenic | 0.974 | pathogenic | -1.818 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
V/P | 0.9797 | likely_pathogenic | 0.9674 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
V/Q | 0.9699 | likely_pathogenic | 0.9551 | pathogenic | -1.533 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
V/R | 0.9721 | likely_pathogenic | 0.96 | pathogenic | -1.452 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/S | 0.9171 | likely_pathogenic | 0.8785 | pathogenic | -2.466 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
V/T | 0.854 | likely_pathogenic | 0.786 | pathogenic | -2.031 | Highly Destabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | N |
V/W | 0.9944 | likely_pathogenic | 0.9899 | pathogenic | -1.393 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/Y | 0.9758 | likely_pathogenic | 0.9592 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.