Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32863 | 98812;98813;98814 | chr2:178539478;178539477;178539476 | chr2:179404205;179404204;179404203 |
N2AB | 31222 | 93889;93890;93891 | chr2:178539478;178539477;178539476 | chr2:179404205;179404204;179404203 |
N2A | 30295 | 91108;91109;91110 | chr2:178539478;178539477;178539476 | chr2:179404205;179404204;179404203 |
N2B | 23798 | 71617;71618;71619 | chr2:178539478;178539477;178539476 | chr2:179404205;179404204;179404203 |
Novex-1 | 23923 | 71992;71993;71994 | chr2:178539478;178539477;178539476 | chr2:179404205;179404204;179404203 |
Novex-2 | 23990 | 72193;72194;72195 | chr2:178539478;178539477;178539476 | chr2:179404205;179404204;179404203 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/Y | rs746957606 | -0.325 | 1.0 | N | 0.812 | 0.504 | 0.559581285787 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
N/Y | rs746957606 | -0.325 | 1.0 | N | 0.812 | 0.504 | 0.559581285787 | gnomAD-4.0.0 | 2.05255E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99454E-07 | 0 | 3.31301E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4516 | ambiguous | 0.409 | ambiguous | -0.313 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
N/C | 0.6312 | likely_pathogenic | 0.5872 | pathogenic | 0.25 | Stabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
N/D | 0.1881 | likely_benign | 0.1789 | benign | 0.096 | Stabilizing | 0.999 | D | 0.703 | prob.neutral | N | 0.468263412 | None | None | N |
N/E | 0.5566 | ambiguous | 0.5326 | ambiguous | 0.074 | Stabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
N/F | 0.7844 | likely_pathogenic | 0.7535 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
N/G | 0.2497 | likely_benign | 0.2421 | benign | -0.509 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
N/H | 0.227 | likely_benign | 0.2108 | benign | -0.448 | Destabilizing | 1.0 | D | 0.792 | deleterious | N | 0.514035774 | None | None | N |
N/I | 0.6663 | likely_pathogenic | 0.6199 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.826 | deleterious | N | 0.508439895 | None | None | N |
N/K | 0.4733 | ambiguous | 0.4572 | ambiguous | 0.03 | Stabilizing | 1.0 | D | 0.805 | deleterious | N | 0.520943104 | None | None | N |
N/L | 0.5568 | ambiguous | 0.5175 | ambiguous | 0.119 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
N/M | 0.5733 | likely_pathogenic | 0.5224 | ambiguous | 0.345 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
N/P | 0.9403 | likely_pathogenic | 0.9279 | pathogenic | 0.003 | Stabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
N/Q | 0.5373 | ambiguous | 0.5085 | ambiguous | -0.436 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
N/R | 0.5819 | likely_pathogenic | 0.5614 | ambiguous | 0.101 | Stabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
N/S | 0.1736 | likely_benign | 0.1607 | benign | -0.235 | Destabilizing | 0.999 | D | 0.645 | neutral | N | 0.514862493 | None | None | N |
N/T | 0.3025 | likely_benign | 0.271 | benign | -0.111 | Destabilizing | 0.999 | D | 0.794 | deleterious | N | 0.484802232 | None | None | N |
N/V | 0.6574 | likely_pathogenic | 0.6124 | pathogenic | 0.003 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
N/W | 0.9178 | likely_pathogenic | 0.9008 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
N/Y | 0.3411 | ambiguous | 0.3103 | benign | -0.264 | Destabilizing | 1.0 | D | 0.812 | deleterious | N | 0.496970166 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.