Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3287 | 10084;10085;10086 | chr2:178764656;178764655;178764654 | chr2:179629383;179629382;179629381 |
N2AB | 3287 | 10084;10085;10086 | chr2:178764656;178764655;178764654 | chr2:179629383;179629382;179629381 |
N2A | 3287 | 10084;10085;10086 | chr2:178764656;178764655;178764654 | chr2:179629383;179629382;179629381 |
N2B | 3241 | 9946;9947;9948 | chr2:178764656;178764655;178764654 | chr2:179629383;179629382;179629381 |
Novex-1 | 3241 | 9946;9947;9948 | chr2:178764656;178764655;178764654 | chr2:179629383;179629382;179629381 |
Novex-2 | 3241 | 9946;9947;9948 | chr2:178764656;178764655;178764654 | chr2:179629383;179629382;179629381 |
Novex-3 | 3287 | 10084;10085;10086 | chr2:178764656;178764655;178764654 | chr2:179629383;179629382;179629381 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | None | None | 0.009 | D | 0.393 | 0.38 | 0.638093873822 | gnomAD-4.0.0 | 1.59051E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85652E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9316 | likely_pathogenic | 0.9829 | pathogenic | -2.072 | Highly Destabilizing | 0.447 | N | 0.479 | neutral | None | None | None | None | I |
F/C | 0.7803 | likely_pathogenic | 0.9418 | pathogenic | -1.202 | Destabilizing | 0.009 | N | 0.393 | neutral | D | 0.664958365 | None | None | I |
F/D | 0.9817 | likely_pathogenic | 0.9946 | pathogenic | -1.537 | Destabilizing | 0.972 | D | 0.599 | neutral | None | None | None | None | I |
F/E | 0.9738 | likely_pathogenic | 0.9917 | pathogenic | -1.352 | Destabilizing | 0.972 | D | 0.597 | neutral | None | None | None | None | I |
F/G | 0.9817 | likely_pathogenic | 0.9946 | pathogenic | -2.489 | Highly Destabilizing | 0.85 | D | 0.595 | neutral | None | None | None | None | I |
F/H | 0.903 | likely_pathogenic | 0.9607 | pathogenic | -0.936 | Destabilizing | 0.92 | D | 0.508 | neutral | None | None | None | None | I |
F/I | 0.3498 | ambiguous | 0.6734 | pathogenic | -0.76 | Destabilizing | 0.016 | N | 0.152 | neutral | N | 0.473727276 | None | None | I |
F/K | 0.9787 | likely_pathogenic | 0.9933 | pathogenic | -1.367 | Destabilizing | 0.92 | D | 0.597 | neutral | None | None | None | None | I |
F/L | 0.9228 | likely_pathogenic | 0.9774 | pathogenic | -0.76 | Destabilizing | 0.201 | N | 0.358 | neutral | N | 0.487631072 | None | None | I |
F/M | 0.7277 | likely_pathogenic | 0.8808 | pathogenic | -0.547 | Destabilizing | 0.92 | D | 0.457 | neutral | None | None | None | None | I |
F/N | 0.9269 | likely_pathogenic | 0.9767 | pathogenic | -1.708 | Destabilizing | 0.972 | D | 0.602 | neutral | None | None | None | None | I |
F/P | 0.9959 | likely_pathogenic | 0.9992 | pathogenic | -1.2 | Destabilizing | 0.972 | D | 0.592 | neutral | None | None | None | None | I |
F/Q | 0.9587 | likely_pathogenic | 0.9859 | pathogenic | -1.612 | Destabilizing | 0.972 | D | 0.593 | neutral | None | None | None | None | I |
F/R | 0.9589 | likely_pathogenic | 0.987 | pathogenic | -1.011 | Destabilizing | 0.972 | D | 0.598 | neutral | None | None | None | None | I |
F/S | 0.9008 | likely_pathogenic | 0.9791 | pathogenic | -2.463 | Highly Destabilizing | 0.81 | D | 0.556 | neutral | N | 0.512854558 | None | None | I |
F/T | 0.8991 | likely_pathogenic | 0.9759 | pathogenic | -2.167 | Highly Destabilizing | 0.617 | D | 0.557 | neutral | None | None | None | None | I |
F/V | 0.4498 | ambiguous | 0.759 | pathogenic | -1.2 | Destabilizing | 0.201 | N | 0.407 | neutral | N | 0.480985731 | None | None | I |
F/W | 0.7866 | likely_pathogenic | 0.8802 | pathogenic | 0.093 | Stabilizing | 0.992 | D | 0.467 | neutral | None | None | None | None | I |
F/Y | 0.2725 | likely_benign | 0.3581 | ambiguous | -0.201 | Destabilizing | 0.016 | N | 0.283 | neutral | N | 0.504588729 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.