Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32873 | 98842;98843;98844 | chr2:178539448;178539447;178539446 | chr2:179404175;179404174;179404173 |
N2AB | 31232 | 93919;93920;93921 | chr2:178539448;178539447;178539446 | chr2:179404175;179404174;179404173 |
N2A | 30305 | 91138;91139;91140 | chr2:178539448;178539447;178539446 | chr2:179404175;179404174;179404173 |
N2B | 23808 | 71647;71648;71649 | chr2:178539448;178539447;178539446 | chr2:179404175;179404174;179404173 |
Novex-1 | 23933 | 72022;72023;72024 | chr2:178539448;178539447;178539446 | chr2:179404175;179404174;179404173 |
Novex-2 | 24000 | 72223;72224;72225 | chr2:178539448;178539447;178539446 | chr2:179404175;179404174;179404173 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1575354700 | None | 0.999 | N | 0.541 | 0.455 | 0.335661160332 | gnomAD-4.0.0 | 3.42099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.25964E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6852 | likely_pathogenic | 0.6254 | pathogenic | -1.354 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | N | 0.474607561 | None | None | N |
E/C | 0.9721 | likely_pathogenic | 0.9637 | pathogenic | -0.735 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
E/D | 0.9185 | likely_pathogenic | 0.8849 | pathogenic | -1.348 | Destabilizing | 0.999 | D | 0.445 | neutral | N | 0.503133523 | None | None | N |
E/F | 0.9832 | likely_pathogenic | 0.9773 | pathogenic | -1.055 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
E/G | 0.8159 | likely_pathogenic | 0.7578 | pathogenic | -1.722 | Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.503133523 | None | None | N |
E/H | 0.9573 | likely_pathogenic | 0.9411 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
E/I | 0.8352 | likely_pathogenic | 0.8033 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
E/K | 0.6819 | likely_pathogenic | 0.61 | pathogenic | -0.827 | Destabilizing | 0.999 | D | 0.541 | neutral | N | 0.467392312 | None | None | N |
E/L | 0.9306 | likely_pathogenic | 0.911 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
E/M | 0.8869 | likely_pathogenic | 0.8603 | pathogenic | 0.284 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/N | 0.9551 | likely_pathogenic | 0.9365 | pathogenic | -1.188 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/P | 0.9981 | likely_pathogenic | 0.9974 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
E/Q | 0.4034 | ambiguous | 0.3495 | ambiguous | -1.079 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.489196045 | None | None | N |
E/R | 0.782 | likely_pathogenic | 0.7341 | pathogenic | -0.66 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/S | 0.8209 | likely_pathogenic | 0.7665 | pathogenic | -1.701 | Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | N |
E/T | 0.8403 | likely_pathogenic | 0.801 | pathogenic | -1.366 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/V | 0.6451 | likely_pathogenic | 0.6034 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.813 | deleterious | N | 0.456653978 | None | None | N |
E/W | 0.9947 | likely_pathogenic | 0.9927 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
E/Y | 0.9792 | likely_pathogenic | 0.971 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.