Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32880 | 98863;98864;98865 | chr2:178539427;178539426;178539425 | chr2:179404154;179404153;179404152 |
N2AB | 31239 | 93940;93941;93942 | chr2:178539427;178539426;178539425 | chr2:179404154;179404153;179404152 |
N2A | 30312 | 91159;91160;91161 | chr2:178539427;178539426;178539425 | chr2:179404154;179404153;179404152 |
N2B | 23815 | 71668;71669;71670 | chr2:178539427;178539426;178539425 | chr2:179404154;179404153;179404152 |
Novex-1 | 23940 | 72043;72044;72045 | chr2:178539427;178539426;178539425 | chr2:179404154;179404153;179404152 |
Novex-2 | 24007 | 72244;72245;72246 | chr2:178539427;178539426;178539425 | chr2:179404154;179404153;179404152 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.006 | N | 0.211 | 0.044 | 0.171388866994 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.254 | likely_benign | 0.2524 | benign | -0.05 | Destabilizing | 0.86 | D | 0.621 | neutral | None | None | None | None | N |
K/C | 0.6221 | likely_pathogenic | 0.6027 | pathogenic | -0.296 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
K/D | 0.4079 | ambiguous | 0.398 | ambiguous | -0.065 | Destabilizing | 0.978 | D | 0.656 | neutral | None | None | None | None | N |
K/E | 0.1573 | likely_benign | 0.156 | benign | -0.082 | Destabilizing | 0.822 | D | 0.61 | neutral | N | 0.346805921 | None | None | N |
K/F | 0.6499 | likely_pathogenic | 0.6351 | pathogenic | -0.4 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/G | 0.3576 | ambiguous | 0.3355 | benign | -0.198 | Destabilizing | 0.956 | D | 0.613 | neutral | None | None | None | None | N |
K/H | 0.2911 | likely_benign | 0.2796 | benign | -0.468 | Destabilizing | 0.994 | D | 0.66 | neutral | None | None | None | None | N |
K/I | 0.2865 | likely_benign | 0.279 | benign | 0.254 | Stabilizing | 0.971 | D | 0.742 | deleterious | N | 0.474580804 | None | None | N |
K/L | 0.2692 | likely_benign | 0.2642 | benign | 0.254 | Stabilizing | 0.956 | D | 0.613 | neutral | None | None | None | None | N |
K/M | 0.2303 | likely_benign | 0.2256 | benign | 0.144 | Stabilizing | 0.998 | D | 0.65 | neutral | None | None | None | None | N |
K/N | 0.3122 | likely_benign | 0.2978 | benign | 0.151 | Stabilizing | 0.942 | D | 0.647 | neutral | N | 0.435697129 | None | None | N |
K/P | 0.3859 | ambiguous | 0.3879 | ambiguous | 0.178 | Stabilizing | 0.993 | D | 0.668 | neutral | None | None | None | None | N |
K/Q | 0.1292 | likely_benign | 0.1274 | benign | -0.055 | Destabilizing | 0.942 | D | 0.663 | neutral | N | 0.408318526 | None | None | N |
K/R | 0.0857 | likely_benign | 0.0826 | benign | -0.042 | Destabilizing | 0.006 | N | 0.211 | neutral | N | 0.422863904 | None | None | N |
K/S | 0.2986 | likely_benign | 0.29 | benign | -0.305 | Destabilizing | 0.86 | D | 0.657 | neutral | None | None | None | None | N |
K/T | 0.1684 | likely_benign | 0.1693 | benign | -0.19 | Destabilizing | 0.942 | D | 0.627 | neutral | N | 0.464806527 | None | None | N |
K/V | 0.2594 | likely_benign | 0.2609 | benign | 0.178 | Stabilizing | 0.978 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/W | 0.6873 | likely_pathogenic | 0.6632 | pathogenic | -0.428 | Destabilizing | 0.998 | D | 0.77 | deleterious | None | None | None | None | N |
K/Y | 0.5279 | ambiguous | 0.5089 | ambiguous | -0.065 | Destabilizing | 0.993 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.