Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32885 | 98878;98879;98880 | chr2:178539412;178539411;178539410 | chr2:179404139;179404138;179404137 |
N2AB | 31244 | 93955;93956;93957 | chr2:178539412;178539411;178539410 | chr2:179404139;179404138;179404137 |
N2A | 30317 | 91174;91175;91176 | chr2:178539412;178539411;178539410 | chr2:179404139;179404138;179404137 |
N2B | 23820 | 71683;71684;71685 | chr2:178539412;178539411;178539410 | chr2:179404139;179404138;179404137 |
Novex-1 | 23945 | 72058;72059;72060 | chr2:178539412;178539411;178539410 | chr2:179404139;179404138;179404137 |
Novex-2 | 24012 | 72259;72260;72261 | chr2:178539412;178539411;178539410 | chr2:179404139;179404138;179404137 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.919 | N | 0.525 | 0.132 | 0.252162846088 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1334 | likely_benign | 0.1514 | benign | 0.018 | Stabilizing | 0.958 | D | 0.539 | neutral | N | 0.470404348 | None | None | N |
E/C | 0.7881 | likely_pathogenic | 0.8158 | pathogenic | -0.092 | Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
E/D | 0.106 | likely_benign | 0.1095 | benign | -0.215 | Destabilizing | 0.005 | N | 0.173 | neutral | N | 0.421613111 | None | None | N |
E/F | 0.6876 | likely_pathogenic | 0.7133 | pathogenic | -0.067 | Destabilizing | 0.997 | D | 0.748 | deleterious | None | None | None | None | N |
E/G | 0.1308 | likely_benign | 0.1444 | benign | -0.093 | Destabilizing | 0.919 | D | 0.55 | neutral | N | 0.458130742 | None | None | N |
E/H | 0.412 | ambiguous | 0.4373 | ambiguous | 0.506 | Stabilizing | 0.997 | D | 0.537 | neutral | None | None | None | None | N |
E/I | 0.3116 | likely_benign | 0.3374 | benign | 0.253 | Stabilizing | 0.997 | D | 0.756 | deleterious | None | None | None | None | N |
E/K | 0.1035 | likely_benign | 0.1123 | benign | 0.457 | Stabilizing | 0.919 | D | 0.525 | neutral | N | 0.462382298 | None | None | N |
E/L | 0.3235 | likely_benign | 0.3603 | ambiguous | 0.253 | Stabilizing | 0.991 | D | 0.726 | deleterious | None | None | None | None | N |
E/M | 0.3937 | ambiguous | 0.4263 | ambiguous | 0.053 | Stabilizing | 0.999 | D | 0.736 | deleterious | None | None | None | None | N |
E/N | 0.2116 | likely_benign | 0.2323 | benign | 0.307 | Stabilizing | 0.938 | D | 0.568 | neutral | None | None | None | None | N |
E/P | 0.3282 | likely_benign | 0.3966 | ambiguous | 0.193 | Stabilizing | 0.997 | D | 0.585 | neutral | None | None | None | None | N |
E/Q | 0.133 | likely_benign | 0.1434 | benign | 0.302 | Stabilizing | 0.958 | D | 0.565 | neutral | N | 0.500900614 | None | None | N |
E/R | 0.1822 | likely_benign | 0.1915 | benign | 0.664 | Stabilizing | 0.991 | D | 0.593 | neutral | None | None | None | None | N |
E/S | 0.1556 | likely_benign | 0.1724 | benign | 0.136 | Stabilizing | 0.938 | D | 0.521 | neutral | None | None | None | None | N |
E/T | 0.1728 | likely_benign | 0.1896 | benign | 0.231 | Stabilizing | 0.968 | D | 0.577 | neutral | None | None | None | None | N |
E/V | 0.1899 | likely_benign | 0.2081 | benign | 0.193 | Stabilizing | 0.996 | D | 0.623 | neutral | N | 0.510634818 | None | None | N |
E/W | 0.8124 | likely_pathogenic | 0.8338 | pathogenic | -0.037 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
E/Y | 0.5717 | likely_pathogenic | 0.5889 | pathogenic | 0.158 | Stabilizing | 0.997 | D | 0.739 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.