Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32886 | 98881;98882;98883 | chr2:178539409;178539408;178539407 | chr2:179404136;179404135;179404134 |
N2AB | 31245 | 93958;93959;93960 | chr2:178539409;178539408;178539407 | chr2:179404136;179404135;179404134 |
N2A | 30318 | 91177;91178;91179 | chr2:178539409;178539408;178539407 | chr2:179404136;179404135;179404134 |
N2B | 23821 | 71686;71687;71688 | chr2:178539409;178539408;178539407 | chr2:179404136;179404135;179404134 |
Novex-1 | 23946 | 72061;72062;72063 | chr2:178539409;178539408;178539407 | chr2:179404136;179404135;179404134 |
Novex-2 | 24013 | 72262;72263;72264 | chr2:178539409;178539408;178539407 | chr2:179404136;179404135;179404134 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.799 | N | 0.547 | 0.119 | 0.229924730088 | gnomAD-4.0.0 | 6.84682E-07 | None | None | None | None | N | None | 2.99061E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1337530273 | -0.506 | 0.012 | N | 0.525 | 0.155 | 0.227934060464 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
E/G | rs1337530273 | -0.506 | 0.012 | N | 0.525 | 0.155 | 0.227934060464 | gnomAD-4.0.0 | 1.36936E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80036E-06 | 0 | 0 |
E/K | rs767866367 | 0.425 | 0.799 | N | 0.507 | 0.14 | 0.221019684889 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs767866367 | 0.425 | 0.799 | N | 0.507 | 0.14 | 0.221019684889 | gnomAD-4.0.0 | 1.59413E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1269 | likely_benign | 0.143 | benign | -0.245 | Destabilizing | 0.799 | D | 0.547 | neutral | N | 0.513909983 | None | None | N |
E/C | 0.7609 | likely_pathogenic | 0.7751 | pathogenic | -0.22 | Destabilizing | 0.998 | D | 0.808 | deleterious | None | None | None | None | N |
E/D | 0.1256 | likely_benign | 0.1231 | benign | -0.043 | Destabilizing | 0.012 | N | 0.182 | neutral | N | 0.483413718 | None | None | N |
E/F | 0.5536 | ambiguous | 0.5957 | pathogenic | -0.204 | Destabilizing | 0.991 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/G | 0.128 | likely_benign | 0.1429 | benign | -0.396 | Destabilizing | 0.012 | N | 0.525 | neutral | N | 0.460264471 | None | None | N |
E/H | 0.4056 | ambiguous | 0.4588 | ambiguous | 0.29 | Stabilizing | 0.974 | D | 0.573 | neutral | None | None | None | None | N |
E/I | 0.1883 | likely_benign | 0.2187 | benign | 0.109 | Stabilizing | 0.974 | D | 0.743 | deleterious | None | None | None | None | N |
E/K | 0.121 | likely_benign | 0.1529 | benign | 0.171 | Stabilizing | 0.799 | D | 0.507 | neutral | N | 0.452920637 | None | None | N |
E/L | 0.2823 | likely_benign | 0.3091 | benign | 0.109 | Stabilizing | 0.974 | D | 0.616 | neutral | None | None | None | None | N |
E/M | 0.3067 | likely_benign | 0.3389 | benign | -0.03 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
E/N | 0.1955 | likely_benign | 0.2152 | benign | 0.09 | Stabilizing | 0.066 | N | 0.323 | neutral | None | None | None | None | N |
E/P | 0.7124 | likely_pathogenic | 0.7514 | pathogenic | 0.009 | Stabilizing | 0.974 | D | 0.657 | prob.neutral | None | None | None | None | N |
E/Q | 0.1262 | likely_benign | 0.1456 | benign | 0.109 | Stabilizing | 0.966 | D | 0.586 | neutral | N | 0.489553043 | None | None | N |
E/R | 0.2249 | likely_benign | 0.2764 | benign | 0.469 | Stabilizing | 0.974 | D | 0.586 | neutral | None | None | None | None | N |
E/S | 0.173 | likely_benign | 0.1911 | benign | -0.155 | Destabilizing | 0.841 | D | 0.504 | neutral | None | None | None | None | N |
E/T | 0.1526 | likely_benign | 0.1734 | benign | -0.034 | Destabilizing | 0.841 | D | 0.639 | neutral | None | None | None | None | N |
E/V | 0.1234 | likely_benign | 0.1418 | benign | 0.009 | Stabilizing | 0.966 | D | 0.627 | neutral | N | 0.469013884 | None | None | N |
E/W | 0.8413 | likely_pathogenic | 0.8587 | pathogenic | -0.11 | Destabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
E/Y | 0.4588 | ambiguous | 0.4858 | ambiguous | 0.018 | Stabilizing | 0.991 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.