Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32887 | 98884;98885;98886 | chr2:178539406;178539405;178539404 | chr2:179404133;179404132;179404131 |
N2AB | 31246 | 93961;93962;93963 | chr2:178539406;178539405;178539404 | chr2:179404133;179404132;179404131 |
N2A | 30319 | 91180;91181;91182 | chr2:178539406;178539405;178539404 | chr2:179404133;179404132;179404131 |
N2B | 23822 | 71689;71690;71691 | chr2:178539406;178539405;178539404 | chr2:179404133;179404132;179404131 |
Novex-1 | 23947 | 72064;72065;72066 | chr2:178539406;178539405;178539404 | chr2:179404133;179404132;179404131 |
Novex-2 | 24014 | 72265;72266;72267 | chr2:178539406;178539405;178539404 | chr2:179404133;179404132;179404131 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs55653324 | -1.249 | 0.029 | N | 0.231 | 0.111 | 0.141422826196 | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 1.96155E-04 | None | 0 | 0 | 1.65893E-04 |
P/A | rs55653324 | -1.249 | 0.029 | N | 0.231 | 0.111 | 0.141422826196 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07297E-04 | 0 |
P/A | rs55653324 | -1.249 | 0.029 | N | 0.231 | 0.111 | 0.141422826196 | gnomAD-4.0.0 | 1.92236E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22955E-05 | None | 0 | 0 | 0 | 3.29439E-04 | 0 |
P/Q | rs774623766 | -0.979 | 0.974 | N | 0.59 | 0.339 | 0.280987212366 | gnomAD-2.1.1 | 7.14E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.56E-05 | 0 |
P/Q | rs774623766 | -0.979 | 0.974 | N | 0.59 | 0.339 | 0.280987212366 | gnomAD-4.0.0 | 6.84775E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00302E-07 | 0 | 0 |
P/R | None | None | 0.974 | N | 0.685 | 0.377 | 0.313518423057 | gnomAD-4.0.0 | 6.84775E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65755E-05 |
P/S | None | None | 0.08 | N | 0.247 | 0.166 | 0.148003135375 | gnomAD-4.0.0 | 1.36944E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73611E-04 | 0 | 1.15955E-05 | 0 |
P/T | rs55653324 | None | 0.728 | N | 0.537 | 0.185 | 0.202086224978 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | rs55653324 | None | 0.728 | N | 0.537 | 0.185 | 0.202086224978 | gnomAD-4.0.0 | 6.57272E-06 | None | None | None | None | N | None | 2.41371E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0708 | likely_benign | 0.0696 | benign | -1.362 | Destabilizing | 0.029 | N | 0.231 | neutral | N | 0.492937278 | None | None | N |
P/C | 0.5402 | ambiguous | 0.4964 | ambiguous | -0.756 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | N |
P/D | 0.7397 | likely_pathogenic | 0.7003 | pathogenic | -1.111 | Destabilizing | 0.876 | D | 0.551 | neutral | None | None | None | None | N |
P/E | 0.5535 | ambiguous | 0.5203 | ambiguous | -1.141 | Destabilizing | 0.876 | D | 0.526 | neutral | None | None | None | None | N |
P/F | 0.651 | likely_pathogenic | 0.6189 | pathogenic | -1.134 | Destabilizing | 0.994 | D | 0.729 | deleterious | None | None | None | None | N |
P/G | 0.377 | ambiguous | 0.3632 | ambiguous | -1.653 | Destabilizing | 0.745 | D | 0.533 | neutral | None | None | None | None | N |
P/H | 0.4172 | ambiguous | 0.3824 | ambiguous | -1.159 | Destabilizing | 0.998 | D | 0.651 | prob.neutral | None | None | None | None | N |
P/I | 0.3671 | ambiguous | 0.3438 | ambiguous | -0.675 | Destabilizing | 0.981 | D | 0.742 | deleterious | None | None | None | None | N |
P/K | 0.4949 | ambiguous | 0.4612 | ambiguous | -1.073 | Destabilizing | 0.876 | D | 0.542 | neutral | None | None | None | None | N |
P/L | 0.2341 | likely_benign | 0.1993 | benign | -0.675 | Destabilizing | 0.842 | D | 0.674 | prob.neutral | N | 0.46069209 | None | None | N |
P/M | 0.3917 | ambiguous | 0.3572 | ambiguous | -0.412 | Destabilizing | 0.998 | D | 0.647 | neutral | None | None | None | None | N |
P/N | 0.5433 | ambiguous | 0.4976 | ambiguous | -0.755 | Destabilizing | 0.961 | D | 0.687 | prob.delet. | None | None | None | None | N |
P/Q | 0.3441 | ambiguous | 0.3132 | benign | -0.966 | Destabilizing | 0.974 | D | 0.59 | neutral | N | 0.472670733 | None | None | N |
P/R | 0.3463 | ambiguous | 0.3187 | benign | -0.503 | Destabilizing | 0.974 | D | 0.685 | prob.delet. | N | 0.477595031 | None | None | N |
P/S | 0.1761 | likely_benign | 0.1647 | benign | -1.253 | Destabilizing | 0.08 | N | 0.247 | neutral | N | 0.461199069 | None | None | N |
P/T | 0.1316 | likely_benign | 0.1192 | benign | -1.176 | Destabilizing | 0.728 | D | 0.537 | neutral | N | 0.467578171 | None | None | N |
P/V | 0.24 | likely_benign | 0.2268 | benign | -0.869 | Destabilizing | 0.876 | D | 0.629 | neutral | None | None | None | None | N |
P/W | 0.7965 | likely_pathogenic | 0.7779 | pathogenic | -1.285 | Destabilizing | 0.998 | D | 0.731 | deleterious | None | None | None | None | N |
P/Y | 0.6324 | likely_pathogenic | 0.6024 | pathogenic | -1.014 | Destabilizing | 0.994 | D | 0.731 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.