Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32892 | 98899;98900;98901 | chr2:178539391;178539390;178539389 | chr2:179404118;179404117;179404116 |
N2AB | 31251 | 93976;93977;93978 | chr2:178539391;178539390;178539389 | chr2:179404118;179404117;179404116 |
N2A | 30324 | 91195;91196;91197 | chr2:178539391;178539390;178539389 | chr2:179404118;179404117;179404116 |
N2B | 23827 | 71704;71705;71706 | chr2:178539391;178539390;178539389 | chr2:179404118;179404117;179404116 |
Novex-1 | 23952 | 72079;72080;72081 | chr2:178539391;178539390;178539389 | chr2:179404118;179404117;179404116 |
Novex-2 | 24019 | 72280;72281;72282 | chr2:178539391;178539390;178539389 | chr2:179404118;179404117;179404116 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.997 | N | 0.691 | 0.271 | 0.259272394797 | gnomAD-4.0.0 | 1.59916E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4346E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.145 | likely_benign | 0.1519 | benign | -0.251 | Destabilizing | 0.997 | D | 0.691 | prob.delet. | N | 0.491177557 | None | None | N |
T/C | 0.6401 | likely_pathogenic | 0.6353 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
T/D | 0.5379 | ambiguous | 0.5192 | ambiguous | 0.043 | Stabilizing | 0.999 | D | 0.728 | deleterious | None | None | None | None | N |
T/E | 0.5016 | ambiguous | 0.5181 | ambiguous | -0.025 | Destabilizing | 0.999 | D | 0.736 | deleterious | None | None | None | None | N |
T/F | 0.3805 | ambiguous | 0.3939 | ambiguous | -0.675 | Destabilizing | 0.999 | D | 0.735 | deleterious | None | None | None | None | N |
T/G | 0.4377 | ambiguous | 0.4196 | ambiguous | -0.393 | Destabilizing | 0.999 | D | 0.665 | prob.neutral | None | None | None | None | N |
T/H | 0.3911 | ambiguous | 0.3982 | ambiguous | -0.619 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
T/I | 0.2968 | likely_benign | 0.3079 | benign | 0.004 | Stabilizing | 0.999 | D | 0.709 | prob.delet. | N | 0.512822266 | None | None | N |
T/K | 0.4248 | ambiguous | 0.4199 | ambiguous | -0.449 | Destabilizing | 0.999 | D | 0.734 | deleterious | N | 0.521153748 | None | None | N |
T/L | 0.1457 | likely_benign | 0.1405 | benign | 0.004 | Stabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
T/M | 0.1218 | likely_benign | 0.1242 | benign | 0.016 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
T/N | 0.121 | likely_benign | 0.121 | benign | -0.258 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
T/P | 0.1887 | likely_benign | 0.1916 | benign | -0.051 | Destabilizing | 0.999 | D | 0.695 | prob.delet. | N | 0.513168983 | None | None | N |
T/Q | 0.3632 | ambiguous | 0.3823 | ambiguous | -0.459 | Destabilizing | 0.999 | D | 0.721 | deleterious | None | None | None | None | N |
T/R | 0.4059 | ambiguous | 0.4059 | ambiguous | -0.141 | Destabilizing | 0.999 | D | 0.693 | prob.delet. | N | 0.46556866 | None | None | N |
T/S | 0.1603 | likely_benign | 0.1578 | benign | -0.434 | Destabilizing | 0.997 | D | 0.695 | prob.delet. | N | 0.480307203 | None | None | N |
T/V | 0.2448 | likely_benign | 0.2522 | benign | -0.051 | Destabilizing | 0.998 | D | 0.766 | deleterious | None | None | None | None | N |
T/W | 0.7705 | likely_pathogenic | 0.7809 | pathogenic | -0.716 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
T/Y | 0.3583 | ambiguous | 0.3753 | ambiguous | -0.432 | Destabilizing | 1.0 | D | 0.736 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.