Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32896 | 98911;98912;98913 | chr2:178539249;178539248;178539247 | chr2:179403976;179403975;179403974 |
N2AB | 31255 | 93988;93989;93990 | chr2:178539249;178539248;178539247 | chr2:179403976;179403975;179403974 |
N2A | 30328 | 91207;91208;91209 | chr2:178539249;178539248;178539247 | chr2:179403976;179403975;179403974 |
N2B | 23831 | 71716;71717;71718 | chr2:178539249;178539248;178539247 | chr2:179403976;179403975;179403974 |
Novex-1 | 23956 | 72091;72092;72093 | chr2:178539249;178539248;178539247 | chr2:179403976;179403975;179403974 |
Novex-2 | 24023 | 72292;72293;72294 | chr2:178539249;178539248;178539247 | chr2:179403976;179403975;179403974 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1335232513 | None | 0.972 | N | 0.73 | 0.236 | 0.468420198123 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/L | rs1335232513 | None | 0.972 | N | 0.73 | 0.236 | 0.468420198123 | gnomAD-4.0.0 | 4.34111E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93764E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1148 | likely_benign | 0.1067 | benign | -0.694 | Destabilizing | 0.908 | D | 0.725 | deleterious | N | 0.506336224 | None | None | I |
P/C | 0.604 | likely_pathogenic | 0.5632 | ambiguous | -0.701 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
P/D | 0.8823 | likely_pathogenic | 0.8964 | pathogenic | -0.375 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | I |
P/E | 0.5371 | ambiguous | 0.543 | ambiguous | -0.489 | Destabilizing | 0.995 | D | 0.815 | deleterious | None | None | None | None | I |
P/F | 0.7635 | likely_pathogenic | 0.7533 | pathogenic | -0.965 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | I |
P/G | 0.7041 | likely_pathogenic | 0.6786 | pathogenic | -0.831 | Destabilizing | 0.995 | D | 0.715 | prob.delet. | None | None | None | None | I |
P/H | 0.5054 | ambiguous | 0.4815 | ambiguous | -0.358 | Destabilizing | 0.999 | D | 0.827 | deleterious | N | 0.488508307 | None | None | I |
P/I | 0.2457 | likely_benign | 0.2338 | benign | -0.48 | Destabilizing | 0.979 | D | 0.709 | prob.delet. | None | None | None | None | I |
P/K | 0.4397 | ambiguous | 0.4243 | ambiguous | -0.389 | Destabilizing | 0.995 | D | 0.814 | deleterious | None | None | None | None | I |
P/L | 0.2272 | likely_benign | 0.2124 | benign | -0.48 | Destabilizing | 0.972 | D | 0.73 | deleterious | N | 0.462082259 | None | None | I |
P/M | 0.4355 | ambiguous | 0.4049 | ambiguous | -0.315 | Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | I |
P/N | 0.7349 | likely_pathogenic | 0.7361 | pathogenic | -0.157 | Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | I |
P/Q | 0.3226 | likely_benign | 0.3063 | benign | -0.464 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | I |
P/R | 0.3301 | likely_benign | 0.3057 | benign | 0.156 | Stabilizing | 0.998 | D | 0.774 | deleterious | N | 0.510357964 | None | None | I |
P/S | 0.2969 | likely_benign | 0.2793 | benign | -0.579 | Destabilizing | 0.993 | D | 0.821 | deleterious | N | 0.469897073 | None | None | I |
P/T | 0.1892 | likely_benign | 0.1787 | benign | -0.595 | Destabilizing | 0.986 | D | 0.841 | deleterious | N | 0.46337616 | None | None | I |
P/V | 0.1747 | likely_benign | 0.1599 | benign | -0.517 | Destabilizing | 0.159 | N | 0.459 | neutral | None | None | None | None | I |
P/W | 0.9178 | likely_pathogenic | 0.9154 | pathogenic | -0.99 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
P/Y | 0.778 | likely_pathogenic | 0.7702 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.