Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32899 | 98920;98921;98922 | chr2:178539240;178539239;178539238 | chr2:179403967;179403966;179403965 |
N2AB | 31258 | 93997;93998;93999 | chr2:178539240;178539239;178539238 | chr2:179403967;179403966;179403965 |
N2A | 30331 | 91216;91217;91218 | chr2:178539240;178539239;178539238 | chr2:179403967;179403966;179403965 |
N2B | 23834 | 71725;71726;71727 | chr2:178539240;178539239;178539238 | chr2:179403967;179403966;179403965 |
Novex-1 | 23959 | 72100;72101;72102 | chr2:178539240;178539239;178539238 | chr2:179403967;179403966;179403965 |
Novex-2 | 24026 | 72301;72302;72303 | chr2:178539240;178539239;178539238 | chr2:179403967;179403966;179403965 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs199689531 | None | 1.0 | N | 0.689 | 0.401 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | rs199689531 | None | 1.0 | N | 0.689 | 0.401 | None | gnomAD-4.0.0 | 1.9713E-05 | None | None | None | None | N | None | 7.23624E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1016 | likely_benign | 0.0868 | benign | -1.402 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.510723323 | None | None | N |
P/C | 0.6836 | likely_pathogenic | 0.6498 | pathogenic | -1.357 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
P/D | 0.9147 | likely_pathogenic | 0.9191 | pathogenic | -1.814 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
P/E | 0.7063 | likely_pathogenic | 0.7058 | pathogenic | -1.847 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
P/F | 0.8209 | likely_pathogenic | 0.8132 | pathogenic | -1.386 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
P/G | 0.5231 | ambiguous | 0.5321 | ambiguous | -1.654 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
P/H | 0.6372 | likely_pathogenic | 0.6122 | pathogenic | -1.117 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.485638379 | None | None | N |
P/I | 0.6346 | likely_pathogenic | 0.6125 | pathogenic | -0.817 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
P/K | 0.6855 | likely_pathogenic | 0.69 | pathogenic | -1.076 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
P/L | 0.433 | ambiguous | 0.4178 | ambiguous | -0.817 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | N | 0.479255596 | None | None | N |
P/M | 0.6132 | likely_pathogenic | 0.586 | pathogenic | -0.708 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
P/N | 0.7943 | likely_pathogenic | 0.7838 | pathogenic | -0.984 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
P/Q | 0.4597 | ambiguous | 0.4445 | ambiguous | -1.28 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
P/R | 0.5822 | likely_pathogenic | 0.5814 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.476484119 | None | None | N |
P/S | 0.3079 | likely_benign | 0.2821 | benign | -1.437 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.479255596 | None | None | N |
P/T | 0.3704 | ambiguous | 0.3473 | ambiguous | -1.37 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.47597714 | None | None | N |
P/V | 0.4808 | ambiguous | 0.4466 | ambiguous | -0.979 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
P/W | 0.9446 | likely_pathogenic | 0.9446 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
P/Y | 0.8277 | likely_pathogenic | 0.8214 | pathogenic | -1.166 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.