Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32905 | 98938;98939;98940 | chr2:178539222;178539221;178539220 | chr2:179403949;179403948;179403947 |
N2AB | 31264 | 94015;94016;94017 | chr2:178539222;178539221;178539220 | chr2:179403949;179403948;179403947 |
N2A | 30337 | 91234;91235;91236 | chr2:178539222;178539221;178539220 | chr2:179403949;179403948;179403947 |
N2B | 23840 | 71743;71744;71745 | chr2:178539222;178539221;178539220 | chr2:179403949;179403948;179403947 |
Novex-1 | 23965 | 72118;72119;72120 | chr2:178539222;178539221;178539220 | chr2:179403949;179403948;179403947 |
Novex-2 | 24032 | 72319;72320;72321 | chr2:178539222;178539221;178539220 | chr2:179403949;179403948;179403947 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs768468641 | -0.164 | 0.999 | N | 0.523 | 0.136 | 0.401185642668 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
E/D | rs768468641 | -0.164 | 0.999 | N | 0.523 | 0.136 | 0.401185642668 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.41E-05 | 0 | 0 | 0 | 0 |
E/D | rs768468641 | -0.164 | 0.999 | N | 0.523 | 0.136 | 0.401185642668 | gnomAD-4.0.0 | 6.84273E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51953E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/G | None | None | 1.0 | N | 0.713 | 0.342 | 0.451599300725 | gnomAD-4.0.0 | 1.59159E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85922E-06 | 0 | 0 |
E/K | None | 0.546 | 0.999 | N | 0.649 | 0.327 | 0.332386209738 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.66E-05 | 0 |
E/K | None | 0.546 | 0.999 | N | 0.649 | 0.327 | 0.332386209738 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 7.35E-05 | 0 | 0 |
E/K | None | 0.546 | 0.999 | N | 0.649 | 0.327 | 0.332386209738 | gnomAD-4.0.0 | 1.42541E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.86493E-05 | 0 | 1.60138E-05 |
E/Q | rs763344306 | 0.126 | 1.0 | N | 0.685 | 0.244 | 0.340992353424 | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 4.13E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.56E-05 | 1.4041E-04 |
E/Q | rs763344306 | 0.126 | 1.0 | N | 0.685 | 0.244 | 0.340992353424 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs763344306 | 0.126 | 1.0 | N | 0.685 | 0.244 | 0.340992353424 | gnomAD-4.0.0 | 2.47897E-06 | None | None | None | None | N | None | 2.66951E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47693E-07 | 0 | 1.60138E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4987 | ambiguous | 0.4776 | ambiguous | -0.54 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.466836108 | None | None | N |
E/C | 0.9701 | likely_pathogenic | 0.959 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
E/D | 0.3201 | likely_benign | 0.2963 | benign | -0.511 | Destabilizing | 0.999 | D | 0.523 | neutral | N | 0.466266676 | None | None | N |
E/F | 0.95 | likely_pathogenic | 0.9311 | pathogenic | -0.201 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/G | 0.6925 | likely_pathogenic | 0.6883 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.476319535 | None | None | N |
E/H | 0.8366 | likely_pathogenic | 0.7928 | pathogenic | -0.01 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/I | 0.6876 | likely_pathogenic | 0.6094 | pathogenic | 0.082 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/K | 0.5139 | ambiguous | 0.4859 | ambiguous | 0.133 | Stabilizing | 0.999 | D | 0.649 | neutral | N | 0.45889178 | None | None | N |
E/L | 0.7547 | likely_pathogenic | 0.7056 | pathogenic | 0.082 | Stabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
E/M | 0.7901 | likely_pathogenic | 0.7443 | pathogenic | 0.171 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/N | 0.6821 | likely_pathogenic | 0.6621 | pathogenic | -0.342 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/P | 0.9871 | likely_pathogenic | 0.9891 | pathogenic | -0.105 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
E/Q | 0.3524 | ambiguous | 0.3205 | benign | -0.275 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.498988964 | None | None | N |
E/R | 0.6613 | likely_pathogenic | 0.628 | pathogenic | 0.421 | Stabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
E/S | 0.5682 | likely_pathogenic | 0.546 | ambiguous | -0.501 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/T | 0.5742 | likely_pathogenic | 0.5355 | ambiguous | -0.299 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/V | 0.4549 | ambiguous | 0.3967 | ambiguous | -0.105 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.497604884 | None | None | N |
E/W | 0.987 | likely_pathogenic | 0.9816 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/Y | 0.9232 | likely_pathogenic | 0.8952 | pathogenic | 0.057 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.