Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32914 | 98965;98966;98967 | chr2:178539195;178539194;178539193 | chr2:179403922;179403921;179403920 |
N2AB | 31273 | 94042;94043;94044 | chr2:178539195;178539194;178539193 | chr2:179403922;179403921;179403920 |
N2A | 30346 | 91261;91262;91263 | chr2:178539195;178539194;178539193 | chr2:179403922;179403921;179403920 |
N2B | 23849 | 71770;71771;71772 | chr2:178539195;178539194;178539193 | chr2:179403922;179403921;179403920 |
Novex-1 | 23974 | 72145;72146;72147 | chr2:178539195;178539194;178539193 | chr2:179403922;179403921;179403920 |
Novex-2 | 24041 | 72346;72347;72348 | chr2:178539195;178539194;178539193 | chr2:179403922;179403921;179403920 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.247 | N | 0.486 | 0.068 | 0.21737058555 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5814 | likely_pathogenic | 0.5071 | ambiguous | -2.303 | Highly Destabilizing | 0.822 | D | 0.575 | neutral | N | 0.491700419 | None | None | N |
V/C | 0.9104 | likely_pathogenic | 0.8456 | pathogenic | -2.535 | Highly Destabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | N |
V/D | 0.9987 | likely_pathogenic | 0.9989 | pathogenic | -2.793 | Highly Destabilizing | 0.99 | D | 0.859 | deleterious | D | 0.533500045 | None | None | N |
V/E | 0.9948 | likely_pathogenic | 0.9957 | pathogenic | -2.549 | Highly Destabilizing | 0.993 | D | 0.864 | deleterious | None | None | None | None | N |
V/F | 0.7788 | likely_pathogenic | 0.8191 | pathogenic | -1.548 | Destabilizing | 0.942 | D | 0.866 | deleterious | N | 0.505734551 | None | None | N |
V/G | 0.9173 | likely_pathogenic | 0.9139 | pathogenic | -2.873 | Highly Destabilizing | 0.971 | D | 0.858 | deleterious | D | 0.533246555 | None | None | N |
V/H | 0.9977 | likely_pathogenic | 0.9977 | pathogenic | -2.61 | Highly Destabilizing | 0.998 | D | 0.856 | deleterious | None | None | None | None | N |
V/I | 0.0991 | likely_benign | 0.0977 | benign | -0.696 | Destabilizing | 0.014 | N | 0.207 | neutral | N | 0.465644394 | None | None | N |
V/K | 0.9958 | likely_pathogenic | 0.997 | pathogenic | -1.964 | Destabilizing | 0.978 | D | 0.863 | deleterious | None | None | None | None | N |
V/L | 0.4797 | ambiguous | 0.4892 | ambiguous | -0.696 | Destabilizing | 0.247 | N | 0.486 | neutral | N | 0.510744753 | None | None | N |
V/M | 0.4906 | ambiguous | 0.5334 | ambiguous | -1.087 | Destabilizing | 0.956 | D | 0.743 | deleterious | None | None | None | None | N |
V/N | 0.9934 | likely_pathogenic | 0.9923 | pathogenic | -2.412 | Highly Destabilizing | 0.993 | D | 0.879 | deleterious | None | None | None | None | N |
V/P | 0.9985 | likely_pathogenic | 0.9985 | pathogenic | -1.206 | Destabilizing | 0.993 | D | 0.872 | deleterious | None | None | None | None | N |
V/Q | 0.9905 | likely_pathogenic | 0.9916 | pathogenic | -2.207 | Highly Destabilizing | 0.993 | D | 0.881 | deleterious | None | None | None | None | N |
V/R | 0.99 | likely_pathogenic | 0.9922 | pathogenic | -1.855 | Destabilizing | 0.993 | D | 0.879 | deleterious | None | None | None | None | N |
V/S | 0.9376 | likely_pathogenic | 0.9154 | pathogenic | -3.129 | Highly Destabilizing | 0.978 | D | 0.853 | deleterious | None | None | None | None | N |
V/T | 0.8465 | likely_pathogenic | 0.8135 | pathogenic | -2.714 | Highly Destabilizing | 0.86 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/W | 0.9983 | likely_pathogenic | 0.9984 | pathogenic | -1.956 | Destabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | N |
V/Y | 0.9865 | likely_pathogenic | 0.9878 | pathogenic | -1.614 | Destabilizing | 0.978 | D | 0.861 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.