Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32916 | 98971;98972;98973 | chr2:178539189;178539188;178539187 | chr2:179403916;179403915;179403914 |
N2AB | 31275 | 94048;94049;94050 | chr2:178539189;178539188;178539187 | chr2:179403916;179403915;179403914 |
N2A | 30348 | 91267;91268;91269 | chr2:178539189;178539188;178539187 | chr2:179403916;179403915;179403914 |
N2B | 23851 | 71776;71777;71778 | chr2:178539189;178539188;178539187 | chr2:179403916;179403915;179403914 |
Novex-1 | 23976 | 72151;72152;72153 | chr2:178539189;178539188;178539187 | chr2:179403916;179403915;179403914 |
Novex-2 | 24043 | 72352;72353;72354 | chr2:178539189;178539188;178539187 | chr2:179403916;179403915;179403914 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.711 | 0.479 | 0.571278246138 | gnomAD-4.0.0 | 2.05265E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69846E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9748 | likely_pathogenic | 0.976 | pathogenic | -2.428 | Highly Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
L/C | 0.9607 | likely_pathogenic | 0.9521 | pathogenic | -1.345 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
L/D | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -2.951 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/E | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -2.609 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
L/F | 0.8479 | likely_pathogenic | 0.8047 | pathogenic | -1.416 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.513481049 | None | None | N |
L/G | 0.9979 | likely_pathogenic | 0.9979 | pathogenic | -3.054 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/H | 0.998 | likely_pathogenic | 0.9978 | pathogenic | -2.908 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/I | 0.173 | likely_benign | 0.1514 | benign | -0.541 | Destabilizing | 0.999 | D | 0.573 | neutral | None | None | None | None | N |
L/K | 0.9986 | likely_pathogenic | 0.9985 | pathogenic | -1.627 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
L/M | 0.508 | ambiguous | 0.4566 | ambiguous | -0.687 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | D | 0.524192244 | None | None | N |
L/N | 0.999 | likely_pathogenic | 0.999 | pathogenic | -2.385 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/P | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -1.161 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/Q | 0.9966 | likely_pathogenic | 0.9967 | pathogenic | -1.949 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
L/R | 0.9966 | likely_pathogenic | 0.9968 | pathogenic | -1.917 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/S | 0.9979 | likely_pathogenic | 0.9981 | pathogenic | -2.898 | Highly Destabilizing | 1.0 | D | 0.794 | deleterious | D | 0.556882035 | None | None | N |
L/T | 0.9851 | likely_pathogenic | 0.9859 | pathogenic | -2.381 | Highly Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
L/V | 0.2129 | likely_benign | 0.2082 | benign | -1.161 | Destabilizing | 0.999 | D | 0.602 | neutral | N | 0.474312208 | None | None | N |
L/W | 0.9951 | likely_pathogenic | 0.9937 | pathogenic | -1.792 | Destabilizing | 1.0 | D | 0.756 | deleterious | D | 0.556882035 | None | None | N |
L/Y | 0.9938 | likely_pathogenic | 0.9916 | pathogenic | -1.56 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.