Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3292 | 10099;10100;10101 | chr2:178764641;178764640;178764639 | chr2:179629368;179629367;179629366 |
N2AB | 3292 | 10099;10100;10101 | chr2:178764641;178764640;178764639 | chr2:179629368;179629367;179629366 |
N2A | 3292 | 10099;10100;10101 | chr2:178764641;178764640;178764639 | chr2:179629368;179629367;179629366 |
N2B | 3246 | 9961;9962;9963 | chr2:178764641;178764640;178764639 | chr2:179629368;179629367;179629366 |
Novex-1 | 3246 | 9961;9962;9963 | chr2:178764641;178764640;178764639 | chr2:179629368;179629367;179629366 |
Novex-2 | 3246 | 9961;9962;9963 | chr2:178764641;178764640;178764639 | chr2:179629368;179629367;179629366 |
Novex-3 | 3292 | 10099;10100;10101 | chr2:178764641;178764640;178764639 | chr2:179629368;179629367;179629366 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.826 | N | 0.314 | 0.307 | 0.281780670237 | gnomAD-4.0.0 | 1.59053E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
Q/R | rs794729586 | 0.042 | 0.92 | N | 0.258 | 0.335 | None | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.82E-06 | 0 |
Q/R | rs794729586 | 0.042 | 0.92 | N | 0.258 | 0.335 | None | gnomAD-4.0.0 | 4.77161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.56952E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3317 | likely_benign | 0.3534 | ambiguous | -0.423 | Destabilizing | 0.863 | D | 0.371 | neutral | None | None | None | None | N |
Q/C | 0.8353 | likely_pathogenic | 0.871 | pathogenic | 0.01 | Stabilizing | 0.999 | D | 0.526 | neutral | None | None | None | None | N |
Q/D | 0.3347 | likely_benign | 0.3823 | ambiguous | 0.25 | Stabilizing | 0.759 | D | 0.285 | neutral | None | None | None | None | N |
Q/E | 0.0811 | likely_benign | 0.0925 | benign | 0.335 | Stabilizing | 0.021 | N | 0.119 | neutral | N | 0.465043481 | None | None | N |
Q/F | 0.8378 | likely_pathogenic | 0.8605 | pathogenic | -0.26 | Destabilizing | 0.997 | D | 0.524 | neutral | None | None | None | None | N |
Q/G | 0.3475 | ambiguous | 0.3924 | ambiguous | -0.731 | Destabilizing | 0.863 | D | 0.445 | neutral | None | None | None | None | N |
Q/H | 0.3254 | likely_benign | 0.346 | ambiguous | -0.343 | Destabilizing | 0.988 | D | 0.434 | neutral | N | 0.514335296 | None | None | N |
Q/I | 0.6205 | likely_pathogenic | 0.6721 | pathogenic | 0.337 | Stabilizing | 0.997 | D | 0.533 | neutral | None | None | None | None | N |
Q/K | 0.109 | likely_benign | 0.1323 | benign | 0.1 | Stabilizing | 0.826 | D | 0.314 | neutral | N | 0.503714813 | None | None | N |
Q/L | 0.2042 | likely_benign | 0.2303 | benign | 0.337 | Stabilizing | 0.959 | D | 0.454 | neutral | N | 0.517785275 | None | None | N |
Q/M | 0.4679 | ambiguous | 0.4874 | ambiguous | 0.443 | Stabilizing | 0.997 | D | 0.441 | neutral | None | None | None | None | N |
Q/N | 0.254 | likely_benign | 0.268 | benign | -0.542 | Destabilizing | 0.079 | N | 0.113 | neutral | None | None | None | None | N |
Q/P | 0.2704 | likely_benign | 0.3173 | benign | 0.114 | Stabilizing | 0.986 | D | 0.437 | neutral | N | 0.518577433 | None | None | N |
Q/R | 0.1314 | likely_benign | 0.1558 | benign | 0.165 | Stabilizing | 0.92 | D | 0.258 | neutral | N | 0.500562266 | None | None | N |
Q/S | 0.315 | likely_benign | 0.3222 | benign | -0.659 | Destabilizing | 0.863 | D | 0.297 | neutral | None | None | None | None | N |
Q/T | 0.3001 | likely_benign | 0.3154 | benign | -0.373 | Destabilizing | 0.939 | D | 0.35 | neutral | None | None | None | None | N |
Q/V | 0.4825 | ambiguous | 0.5162 | ambiguous | 0.114 | Stabilizing | 0.969 | D | 0.488 | neutral | None | None | None | None | N |
Q/W | 0.7137 | likely_pathogenic | 0.7819 | pathogenic | -0.151 | Destabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | N |
Q/Y | 0.6397 | likely_pathogenic | 0.6896 | pathogenic | 0.104 | Stabilizing | 0.997 | D | 0.467 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.