Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32927 | 99004;99005;99006 | chr2:178539156;178539155;178539154 | chr2:179403883;179403882;179403881 |
N2AB | 31286 | 94081;94082;94083 | chr2:178539156;178539155;178539154 | chr2:179403883;179403882;179403881 |
N2A | 30359 | 91300;91301;91302 | chr2:178539156;178539155;178539154 | chr2:179403883;179403882;179403881 |
N2B | 23862 | 71809;71810;71811 | chr2:178539156;178539155;178539154 | chr2:179403883;179403882;179403881 |
Novex-1 | 23987 | 72184;72185;72186 | chr2:178539156;178539155;178539154 | chr2:179403883;179403882;179403881 |
Novex-2 | 24054 | 72385;72386;72387 | chr2:178539156;178539155;178539154 | chr2:179403883;179403882;179403881 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs1559083914 | None | 1.0 | N | 0.795 | 0.476 | 0.451213972277 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
S/C | rs1559083914 | None | 1.0 | N | 0.795 | 0.476 | 0.451213972277 | gnomAD-4.0.0 | 1.36843E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31873E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1502 | likely_benign | 0.1363 | benign | -0.417 | Destabilizing | 0.997 | D | 0.606 | neutral | N | 0.515171925 | None | None | N |
S/C | 0.1478 | likely_benign | 0.1793 | benign | -0.386 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.480766988 | None | None | N |
S/D | 0.9572 | likely_pathogenic | 0.9372 | pathogenic | -1.003 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
S/E | 0.9537 | likely_pathogenic | 0.9462 | pathogenic | -1.053 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | N |
S/F | 0.7185 | likely_pathogenic | 0.7183 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.82 | deleterious | D | 0.525863041 | None | None | N |
S/G | 0.3599 | ambiguous | 0.2742 | benign | -0.583 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
S/H | 0.7984 | likely_pathogenic | 0.8074 | pathogenic | -1.218 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
S/I | 0.7611 | likely_pathogenic | 0.8012 | pathogenic | -0.096 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
S/K | 0.9729 | likely_pathogenic | 0.9745 | pathogenic | -0.663 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
S/L | 0.3767 | ambiguous | 0.3826 | ambiguous | -0.096 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
S/M | 0.6024 | likely_pathogenic | 0.6074 | pathogenic | 0.427 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
S/N | 0.6565 | likely_pathogenic | 0.6168 | pathogenic | -0.677 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
S/P | 0.9913 | likely_pathogenic | 0.9933 | pathogenic | -0.173 | Destabilizing | 1.0 | D | 0.828 | deleterious | D | 0.537130441 | None | None | N |
S/Q | 0.8714 | likely_pathogenic | 0.8716 | pathogenic | -1.017 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
S/R | 0.9506 | likely_pathogenic | 0.9532 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
S/T | 0.3329 | likely_benign | 0.3087 | benign | -0.603 | Destabilizing | 0.999 | D | 0.631 | neutral | N | 0.479246051 | None | None | N |
S/V | 0.6461 | likely_pathogenic | 0.677 | pathogenic | -0.173 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
S/W | 0.8487 | likely_pathogenic | 0.8451 | pathogenic | -0.991 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
S/Y | 0.6546 | likely_pathogenic | 0.6656 | pathogenic | -0.673 | Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.525609552 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.