Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32929 | 99010;99011;99012 | chr2:178539150;178539149;178539148 | chr2:179403877;179403876;179403875 |
N2AB | 31288 | 94087;94088;94089 | chr2:178539150;178539149;178539148 | chr2:179403877;179403876;179403875 |
N2A | 30361 | 91306;91307;91308 | chr2:178539150;178539149;178539148 | chr2:179403877;179403876;179403875 |
N2B | 23864 | 71815;71816;71817 | chr2:178539150;178539149;178539148 | chr2:179403877;179403876;179403875 |
Novex-1 | 23989 | 72190;72191;72192 | chr2:178539150;178539149;178539148 | chr2:179403877;179403876;179403875 |
Novex-2 | 24056 | 72391;72392;72393 | chr2:178539150;178539149;178539148 | chr2:179403877;179403876;179403875 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.998 | N | 0.63 | 0.408 | 0.62434799699 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | rs2154139645 | None | 0.767 | N | 0.363 | 0.237 | 0.411133732114 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9457 | likely_pathogenic | 0.9377 | pathogenic | -1.907 | Destabilizing | 0.998 | D | 0.63 | neutral | N | 0.482880129 | None | None | N |
V/C | 0.9776 | likely_pathogenic | 0.9626 | pathogenic | -1.357 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
V/D | 0.9926 | likely_pathogenic | 0.9883 | pathogenic | -2.162 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | N | 0.520079099 | None | None | N |
V/E | 0.9791 | likely_pathogenic | 0.9727 | pathogenic | -2.101 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/F | 0.8993 | likely_pathogenic | 0.8916 | pathogenic | -1.434 | Destabilizing | 0.999 | D | 0.897 | deleterious | N | 0.503729407 | None | None | N |
V/G | 0.9527 | likely_pathogenic | 0.9383 | pathogenic | -2.302 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | N | 0.506771282 | None | None | N |
V/H | 0.9956 | likely_pathogenic | 0.9918 | pathogenic | -1.909 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/I | 0.0818 | likely_benign | 0.0802 | benign | -0.878 | Destabilizing | 0.767 | D | 0.363 | neutral | N | 0.365325472 | None | None | N |
V/K | 0.99 | likely_pathogenic | 0.9875 | pathogenic | -1.592 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/L | 0.666 | likely_pathogenic | 0.6184 | pathogenic | -0.878 | Destabilizing | 0.981 | D | 0.629 | neutral | N | 0.470476998 | None | None | N |
V/M | 0.7411 | likely_pathogenic | 0.6959 | pathogenic | -0.637 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
V/N | 0.9611 | likely_pathogenic | 0.9091 | pathogenic | -1.518 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
V/P | 0.932 | likely_pathogenic | 0.9379 | pathogenic | -1.189 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
V/Q | 0.986 | likely_pathogenic | 0.98 | pathogenic | -1.628 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
V/R | 0.9858 | likely_pathogenic | 0.982 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
V/S | 0.9682 | likely_pathogenic | 0.9497 | pathogenic | -2.071 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/T | 0.9245 | likely_pathogenic | 0.907 | pathogenic | -1.893 | Destabilizing | 0.998 | D | 0.73 | prob.delet. | None | None | None | None | N |
V/W | 0.9976 | likely_pathogenic | 0.9957 | pathogenic | -1.746 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/Y | 0.9877 | likely_pathogenic | 0.9803 | pathogenic | -1.446 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.