Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32933 | 99022;99023;99024 | chr2:178539138;178539137;178539136 | chr2:179403865;179403864;179403863 |
N2AB | 31292 | 94099;94100;94101 | chr2:178539138;178539137;178539136 | chr2:179403865;179403864;179403863 |
N2A | 30365 | 91318;91319;91320 | chr2:178539138;178539137;178539136 | chr2:179403865;179403864;179403863 |
N2B | 23868 | 71827;71828;71829 | chr2:178539138;178539137;178539136 | chr2:179403865;179403864;179403863 |
Novex-1 | 23993 | 72202;72203;72204 | chr2:178539138;178539137;178539136 | chr2:179403865;179403864;179403863 |
Novex-2 | 24060 | 72403;72404;72405 | chr2:178539138;178539137;178539136 | chr2:179403865;179403864;179403863 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs775150547 | -2.157 | 1.0 | N | 0.765 | 0.368 | None | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 1.24008E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/H | rs775150547 | -2.157 | 1.0 | N | 0.765 | 0.368 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.20651E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/H | rs775150547 | -2.157 | 1.0 | N | 0.765 | 0.368 | None | gnomAD-4.0.0 | 7.68699E-06 | None | None | None | None | N | None | 1.01492E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9092 | likely_pathogenic | 0.8867 | pathogenic | -3.239 | Highly Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
Y/C | 0.368 | ambiguous | 0.322 | benign | -1.652 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.48188607 | None | None | N |
Y/D | 0.8987 | likely_pathogenic | 0.8864 | pathogenic | -2.728 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.457334342 | None | None | N |
Y/E | 0.9612 | likely_pathogenic | 0.954 | pathogenic | -2.575 | Highly Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
Y/F | 0.0933 | likely_benign | 0.0856 | benign | -1.309 | Destabilizing | 0.434 | N | 0.356 | neutral | N | 0.427051508 | None | None | N |
Y/G | 0.9446 | likely_pathogenic | 0.9341 | pathogenic | -3.593 | Highly Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
Y/H | 0.3592 | ambiguous | 0.3643 | ambiguous | -1.852 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.442578321 | None | None | N |
Y/I | 0.5967 | likely_pathogenic | 0.4652 | ambiguous | -2.084 | Highly Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
Y/K | 0.966 | likely_pathogenic | 0.9556 | pathogenic | -1.996 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
Y/L | 0.6884 | likely_pathogenic | 0.6154 | pathogenic | -2.084 | Highly Destabilizing | 0.994 | D | 0.547 | neutral | None | None | None | None | N |
Y/M | 0.8203 | likely_pathogenic | 0.7559 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Y/N | 0.6385 | likely_pathogenic | 0.5758 | pathogenic | -2.49 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.442980966 | None | None | N |
Y/P | 0.9983 | likely_pathogenic | 0.998 | pathogenic | -2.479 | Highly Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
Y/Q | 0.9004 | likely_pathogenic | 0.8809 | pathogenic | -2.4 | Highly Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Y/R | 0.8967 | likely_pathogenic | 0.8814 | pathogenic | -1.472 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
Y/S | 0.6915 | likely_pathogenic | 0.6518 | pathogenic | -2.951 | Highly Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.44292225 | None | None | N |
Y/T | 0.8322 | likely_pathogenic | 0.793 | pathogenic | -2.703 | Highly Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
Y/V | 0.5827 | likely_pathogenic | 0.479 | ambiguous | -2.479 | Highly Destabilizing | 0.997 | D | 0.648 | neutral | None | None | None | None | N |
Y/W | 0.4688 | ambiguous | 0.5162 | ambiguous | -0.58 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.