Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32938 | 99037;99038;99039 | chr2:178539123;178539122;178539121 | chr2:179403850;179403849;179403848 |
N2AB | 31297 | 94114;94115;94116 | chr2:178539123;178539122;178539121 | chr2:179403850;179403849;179403848 |
N2A | 30370 | 91333;91334;91335 | chr2:178539123;178539122;178539121 | chr2:179403850;179403849;179403848 |
N2B | 23873 | 71842;71843;71844 | chr2:178539123;178539122;178539121 | chr2:179403850;179403849;179403848 |
Novex-1 | 23998 | 72217;72218;72219 | chr2:178539123;178539122;178539121 | chr2:179403850;179403849;179403848 |
Novex-2 | 24065 | 72418;72419;72420 | chr2:178539123;178539122;178539121 | chr2:179403850;179403849;179403848 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1170456580 | -0.45 | 1.0 | N | 0.601 | 0.278 | 0.225215365344 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/Q | rs1170456580 | -0.45 | 1.0 | N | 0.601 | 0.278 | 0.225215365344 | gnomAD-4.0.0 | 1.5913E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6451 | likely_pathogenic | 0.5406 | ambiguous | -1.156 | Destabilizing | 0.999 | D | 0.64 | neutral | N | 0.50122398 | None | None | N |
E/C | 0.9877 | likely_pathogenic | 0.9769 | pathogenic | -0.496 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
E/D | 0.5441 | ambiguous | 0.4832 | ambiguous | -1.002 | Destabilizing | 0.999 | D | 0.421 | neutral | N | 0.471690506 | None | None | N |
E/F | 0.988 | likely_pathogenic | 0.9777 | pathogenic | -0.665 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/G | 0.7213 | likely_pathogenic | 0.6493 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.655 | neutral | D | 0.523466121 | None | None | N |
E/H | 0.9674 | likely_pathogenic | 0.9481 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | N |
E/I | 0.8907 | likely_pathogenic | 0.8285 | pathogenic | -0.26 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/K | 0.8239 | likely_pathogenic | 0.7588 | pathogenic | -0.444 | Destabilizing | 0.999 | D | 0.575 | neutral | N | 0.467687409 | None | None | N |
E/L | 0.8752 | likely_pathogenic | 0.7764 | pathogenic | -0.26 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/M | 0.8973 | likely_pathogenic | 0.8269 | pathogenic | 0.246 | Stabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
E/N | 0.8515 | likely_pathogenic | 0.7992 | pathogenic | -0.977 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/P | 0.92 | likely_pathogenic | 0.9048 | pathogenic | -0.539 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/Q | 0.6253 | likely_pathogenic | 0.5119 | ambiguous | -0.89 | Destabilizing | 1.0 | D | 0.601 | neutral | N | 0.500010471 | None | None | N |
E/R | 0.9015 | likely_pathogenic | 0.8598 | pathogenic | -0.153 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/S | 0.8415 | likely_pathogenic | 0.7896 | pathogenic | -1.268 | Destabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | N |
E/T | 0.8766 | likely_pathogenic | 0.8304 | pathogenic | -0.985 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/V | 0.7452 | likely_pathogenic | 0.6658 | pathogenic | -0.539 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.469802303 | None | None | N |
E/W | 0.9975 | likely_pathogenic | 0.9953 | pathogenic | -0.325 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/Y | 0.9786 | likely_pathogenic | 0.9593 | pathogenic | -0.377 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.