Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3294 | 10105;10106;10107 | chr2:178764635;178764634;178764633 | chr2:179629362;179629361;179629360 |
N2AB | 3294 | 10105;10106;10107 | chr2:178764635;178764634;178764633 | chr2:179629362;179629361;179629360 |
N2A | 3294 | 10105;10106;10107 | chr2:178764635;178764634;178764633 | chr2:179629362;179629361;179629360 |
N2B | 3248 | 9967;9968;9969 | chr2:178764635;178764634;178764633 | chr2:179629362;179629361;179629360 |
Novex-1 | 3248 | 9967;9968;9969 | chr2:178764635;178764634;178764633 | chr2:179629362;179629361;179629360 |
Novex-2 | 3248 | 9967;9968;9969 | chr2:178764635;178764634;178764633 | chr2:179629362;179629361;179629360 |
Novex-3 | 3294 | 10105;10106;10107 | chr2:178764635;178764634;178764633 | chr2:179629362;179629361;179629360 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | N | 0.753 | 0.575 | 0.636119361578 | gnomAD-4.0.0 | 2.40066E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62502E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9171 | likely_pathogenic | 0.9611 | pathogenic | -3.075 | Highly Destabilizing | 0.985 | D | 0.682 | prob.neutral | None | None | None | None | N |
Y/C | 0.5206 | ambiguous | 0.7488 | pathogenic | -1.836 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.469289594 | None | None | N |
Y/D | 0.9423 | likely_pathogenic | 0.98 | pathogenic | -3.181 | Highly Destabilizing | 0.994 | D | 0.739 | prob.delet. | D | 0.593101169 | None | None | N |
Y/E | 0.9783 | likely_pathogenic | 0.9919 | pathogenic | -3.021 | Highly Destabilizing | 0.97 | D | 0.697 | prob.neutral | None | None | None | None | N |
Y/F | 0.2254 | likely_benign | 0.2579 | benign | -1.098 | Destabilizing | 0.98 | D | 0.653 | neutral | N | 0.515047253 | None | None | N |
Y/G | 0.9317 | likely_pathogenic | 0.969 | pathogenic | -3.47 | Highly Destabilizing | 0.985 | D | 0.723 | prob.delet. | None | None | None | None | N |
Y/H | 0.5086 | ambiguous | 0.6871 | pathogenic | -1.983 | Destabilizing | 0.071 | N | 0.457 | neutral | N | 0.449172325 | None | None | N |
Y/I | 0.8972 | likely_pathogenic | 0.9558 | pathogenic | -1.786 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
Y/K | 0.9685 | likely_pathogenic | 0.9888 | pathogenic | -2.143 | Highly Destabilizing | 0.991 | D | 0.713 | prob.delet. | None | None | None | None | N |
Y/L | 0.87 | likely_pathogenic | 0.9366 | pathogenic | -1.786 | Destabilizing | 0.985 | D | 0.665 | neutral | None | None | None | None | N |
Y/M | 0.9035 | likely_pathogenic | 0.954 | pathogenic | -1.487 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
Y/N | 0.6837 | likely_pathogenic | 0.8583 | pathogenic | -2.768 | Highly Destabilizing | 0.989 | D | 0.711 | prob.delet. | D | 0.568899777 | None | None | N |
Y/P | 0.9971 | likely_pathogenic | 0.9992 | pathogenic | -2.226 | Highly Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
Y/Q | 0.9429 | likely_pathogenic | 0.9804 | pathogenic | -2.609 | Highly Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
Y/R | 0.9351 | likely_pathogenic | 0.9751 | pathogenic | -1.733 | Destabilizing | 0.991 | D | 0.729 | prob.delet. | None | None | None | None | N |
Y/S | 0.8021 | likely_pathogenic | 0.9168 | pathogenic | -3.144 | Highly Destabilizing | 0.98 | D | 0.705 | prob.neutral | N | 0.511760013 | None | None | N |
Y/T | 0.9149 | likely_pathogenic | 0.9686 | pathogenic | -2.874 | Highly Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | N |
Y/V | 0.8137 | likely_pathogenic | 0.9078 | pathogenic | -2.226 | Highly Destabilizing | 0.995 | D | 0.684 | prob.neutral | None | None | None | None | N |
Y/W | 0.7696 | likely_pathogenic | 0.8329 | pathogenic | -0.536 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.