Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32940 | 99043;99044;99045 | chr2:178539117;178539116;178539115 | chr2:179403844;179403843;179403842 |
N2AB | 31299 | 94120;94121;94122 | chr2:178539117;178539116;178539115 | chr2:179403844;179403843;179403842 |
N2A | 30372 | 91339;91340;91341 | chr2:178539117;178539116;178539115 | chr2:179403844;179403843;179403842 |
N2B | 23875 | 71848;71849;71850 | chr2:178539117;178539116;178539115 | chr2:179403844;179403843;179403842 |
Novex-1 | 24000 | 72223;72224;72225 | chr2:178539117;178539116;178539115 | chr2:179403844;179403843;179403842 |
Novex-2 | 24067 | 72424;72425;72426 | chr2:178539117;178539116;178539115 | chr2:179403844;179403843;179403842 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.997 | N | 0.566 | 0.451 | 0.465294738428 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0781 | likely_benign | 0.0763 | benign | -0.208 | Destabilizing | 0.489 | N | 0.448 | neutral | N | 0.470997073 | None | None | N |
S/C | 0.1718 | likely_benign | 0.1635 | benign | -0.214 | Destabilizing | 0.997 | D | 0.566 | neutral | N | 0.475776557 | None | None | N |
S/D | 0.4472 | ambiguous | 0.3984 | ambiguous | -0.128 | Destabilizing | 0.86 | D | 0.403 | neutral | None | None | None | None | N |
S/E | 0.5962 | likely_pathogenic | 0.5261 | ambiguous | -0.245 | Destabilizing | 0.86 | D | 0.401 | neutral | None | None | None | None | N |
S/F | 0.2995 | likely_benign | 0.2806 | benign | -0.932 | Destabilizing | 0.942 | D | 0.573 | neutral | N | 0.459396 | None | None | N |
S/G | 0.084 | likely_benign | 0.077 | benign | -0.257 | Destabilizing | 0.86 | D | 0.409 | neutral | None | None | None | None | N |
S/H | 0.4414 | ambiguous | 0.3899 | ambiguous | -0.674 | Destabilizing | 0.998 | D | 0.537 | neutral | None | None | None | None | N |
S/I | 0.2572 | likely_benign | 0.2434 | benign | -0.21 | Destabilizing | 0.915 | D | 0.483 | neutral | None | None | None | None | N |
S/K | 0.719 | likely_pathogenic | 0.6166 | pathogenic | -0.375 | Destabilizing | 0.86 | D | 0.409 | neutral | None | None | None | None | N |
S/L | 0.1313 | likely_benign | 0.1164 | benign | -0.21 | Destabilizing | 0.754 | D | 0.469 | neutral | None | None | None | None | N |
S/M | 0.2345 | likely_benign | 0.1992 | benign | 0.026 | Stabilizing | 0.559 | D | 0.451 | neutral | None | None | None | None | N |
S/N | 0.1434 | likely_benign | 0.122 | benign | -0.069 | Destabilizing | 0.86 | D | 0.411 | neutral | None | None | None | None | N |
S/P | 0.3961 | ambiguous | 0.4464 | ambiguous | -0.185 | Destabilizing | 0.97 | D | 0.507 | neutral | N | 0.458857282 | None | None | N |
S/Q | 0.5626 | ambiguous | 0.4753 | ambiguous | -0.371 | Destabilizing | 0.978 | D | 0.455 | neutral | None | None | None | None | N |
S/R | 0.6986 | likely_pathogenic | 0.6137 | pathogenic | -0.09 | Destabilizing | 0.956 | D | 0.507 | neutral | None | None | None | None | N |
S/T | 0.0762 | likely_benign | 0.068 | benign | -0.189 | Destabilizing | 0.014 | N | 0.345 | neutral | N | 0.473805305 | None | None | N |
S/V | 0.2216 | likely_benign | 0.205 | benign | -0.185 | Destabilizing | 0.754 | D | 0.443 | neutral | None | None | None | None | N |
S/W | 0.5529 | ambiguous | 0.5242 | ambiguous | -0.982 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
S/Y | 0.3066 | likely_benign | 0.2964 | benign | -0.683 | Destabilizing | 0.99 | D | 0.591 | neutral | N | 0.520809818 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.