Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32945 | 99058;99059;99060 | chr2:178539102;178539101;178539100 | chr2:179403829;179403828;179403827 |
N2AB | 31304 | 94135;94136;94137 | chr2:178539102;178539101;178539100 | chr2:179403829;179403828;179403827 |
N2A | 30377 | 91354;91355;91356 | chr2:178539102;178539101;178539100 | chr2:179403829;179403828;179403827 |
N2B | 23880 | 71863;71864;71865 | chr2:178539102;178539101;178539100 | chr2:179403829;179403828;179403827 |
Novex-1 | 24005 | 72238;72239;72240 | chr2:178539102;178539101;178539100 | chr2:179403829;179403828;179403827 |
Novex-2 | 24072 | 72439;72440;72441 | chr2:178539102;178539101;178539100 | chr2:179403829;179403828;179403827 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.997 | N | 0.545 | 0.32 | 0.418221603839 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6317 | likely_pathogenic | 0.6065 | pathogenic | -1.151 | Destabilizing | 0.999 | D | 0.56 | neutral | N | 0.488716042 | None | None | N |
V/C | 0.896 | likely_pathogenic | 0.8853 | pathogenic | -0.773 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
V/D | 0.8786 | likely_pathogenic | 0.8637 | pathogenic | -0.932 | Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.50018383 | None | None | N |
V/E | 0.6862 | likely_pathogenic | 0.6712 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/F | 0.3496 | ambiguous | 0.3362 | benign | -0.888 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.45743313 | None | None | N |
V/G | 0.6256 | likely_pathogenic | 0.6136 | pathogenic | -1.414 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.472725138 | None | None | N |
V/H | 0.846 | likely_pathogenic | 0.8356 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/I | 0.1002 | likely_benign | 0.0999 | benign | -0.551 | Destabilizing | 0.997 | D | 0.491 | neutral | N | 0.467244692 | None | None | N |
V/K | 0.7754 | likely_pathogenic | 0.7556 | pathogenic | -1.058 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/L | 0.4237 | ambiguous | 0.4225 | ambiguous | -0.551 | Destabilizing | 0.997 | D | 0.545 | neutral | N | 0.472727869 | None | None | N |
V/M | 0.3291 | likely_benign | 0.3223 | benign | -0.477 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/N | 0.6411 | likely_pathogenic | 0.6257 | pathogenic | -0.822 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
V/P | 0.9877 | likely_pathogenic | 0.9902 | pathogenic | -0.716 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/Q | 0.603 | likely_pathogenic | 0.5922 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/R | 0.7434 | likely_pathogenic | 0.7244 | pathogenic | -0.484 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
V/S | 0.6186 | likely_pathogenic | 0.5959 | pathogenic | -1.274 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/T | 0.5378 | ambiguous | 0.5061 | ambiguous | -1.204 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
V/W | 0.947 | likely_pathogenic | 0.9447 | pathogenic | -1.039 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
V/Y | 0.7831 | likely_pathogenic | 0.7726 | pathogenic | -0.765 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.