Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32946 | 99061;99062;99063 | chr2:178539099;178539098;178539097 | chr2:179403826;179403825;179403824 |
N2AB | 31305 | 94138;94139;94140 | chr2:178539099;178539098;178539097 | chr2:179403826;179403825;179403824 |
N2A | 30378 | 91357;91358;91359 | chr2:178539099;178539098;178539097 | chr2:179403826;179403825;179403824 |
N2B | 23881 | 71866;71867;71868 | chr2:178539099;178539098;178539097 | chr2:179403826;179403825;179403824 |
Novex-1 | 24006 | 72241;72242;72243 | chr2:178539099;178539098;178539097 | chr2:179403826;179403825;179403824 |
Novex-2 | 24073 | 72442;72443;72444 | chr2:178539099;178539098;178539097 | chr2:179403826;179403825;179403824 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 1.0 | N | 0.685 | 0.47 | 0.514416127146 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9136 | likely_pathogenic | 0.9055 | pathogenic | -0.767 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | N |
R/C | 0.5687 | likely_pathogenic | 0.5381 | ambiguous | -0.823 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
R/D | 0.979 | likely_pathogenic | 0.9791 | pathogenic | -0.03 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
R/E | 0.8761 | likely_pathogenic | 0.861 | pathogenic | 0.14 | Stabilizing | 0.999 | D | 0.672 | neutral | None | None | None | None | N |
R/F | 0.9345 | likely_pathogenic | 0.9271 | pathogenic | -0.338 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
R/G | 0.905 | likely_pathogenic | 0.8978 | pathogenic | -1.119 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.490638355 | None | None | N |
R/H | 0.3836 | ambiguous | 0.4041 | ambiguous | -1.336 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
R/I | 0.7126 | likely_pathogenic | 0.6758 | pathogenic | 0.193 | Stabilizing | 1.0 | D | 0.768 | deleterious | N | 0.511131542 | None | None | N |
R/K | 0.2633 | likely_benign | 0.3141 | benign | -0.705 | Destabilizing | 0.997 | D | 0.507 | neutral | N | 0.440770167 | None | None | N |
R/L | 0.6068 | likely_pathogenic | 0.6084 | pathogenic | 0.193 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
R/M | 0.7648 | likely_pathogenic | 0.7598 | pathogenic | -0.369 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
R/N | 0.951 | likely_pathogenic | 0.9511 | pathogenic | -0.422 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
R/P | 0.8544 | likely_pathogenic | 0.854 | pathogenic | -0.106 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
R/Q | 0.2984 | likely_benign | 0.3028 | benign | -0.425 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
R/S | 0.9499 | likely_pathogenic | 0.9458 | pathogenic | -1.155 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.49063884 | None | None | N |
R/T | 0.7859 | likely_pathogenic | 0.7829 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.46272152 | None | None | N |
R/V | 0.7904 | likely_pathogenic | 0.784 | pathogenic | -0.106 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
R/W | 0.6022 | likely_pathogenic | 0.563 | ambiguous | 0.016 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
R/Y | 0.8622 | likely_pathogenic | 0.8497 | pathogenic | 0.272 | Stabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.