Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32952 | 99079;99080;99081 | chr2:178539081;178539080;178539079 | chr2:179403808;179403807;179403806 |
N2AB | 31311 | 94156;94157;94158 | chr2:178539081;178539080;178539079 | chr2:179403808;179403807;179403806 |
N2A | 30384 | 91375;91376;91377 | chr2:178539081;178539080;178539079 | chr2:179403808;179403807;179403806 |
N2B | 23887 | 71884;71885;71886 | chr2:178539081;178539080;178539079 | chr2:179403808;179403807;179403806 |
Novex-1 | 24012 | 72259;72260;72261 | chr2:178539081;178539080;178539079 | chr2:179403808;179403807;179403806 |
Novex-2 | 24079 | 72460;72461;72462 | chr2:178539081;178539080;178539079 | chr2:179403808;179403807;179403806 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs977201230 | -1.39 | 0.998 | N | 0.687 | 0.413 | 0.441221003447 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/F | rs977201230 | -1.39 | 0.998 | N | 0.687 | 0.413 | 0.441221003447 | gnomAD-4.0.0 | 4.77394E-06 | None | None | None | None | N | None | 0 | 6.85997E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9546 | likely_pathogenic | 0.9513 | pathogenic | -1.93 | Destabilizing | 0.992 | D | 0.518 | neutral | None | None | None | None | N |
I/C | 0.9593 | likely_pathogenic | 0.9554 | pathogenic | -0.956 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
I/D | 0.9966 | likely_pathogenic | 0.9966 | pathogenic | -2.085 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
I/E | 0.9887 | likely_pathogenic | 0.9878 | pathogenic | -1.793 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
I/F | 0.781 | likely_pathogenic | 0.7594 | pathogenic | -1.054 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | N | 0.515478569 | None | None | N |
I/G | 0.9921 | likely_pathogenic | 0.992 | pathogenic | -2.52 | Highly Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
I/H | 0.9879 | likely_pathogenic | 0.9856 | pathogenic | -2.239 | Highly Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
I/K | 0.9816 | likely_pathogenic | 0.9774 | pathogenic | -1.084 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
I/L | 0.4205 | ambiguous | 0.4089 | ambiguous | -0.202 | Destabilizing | 0.889 | D | 0.4 | neutral | N | 0.455238187 | None | None | N |
I/M | 0.3728 | ambiguous | 0.3528 | ambiguous | -0.251 | Destabilizing | 0.998 | D | 0.672 | neutral | N | 0.470937484 | None | None | N |
I/N | 0.9435 | likely_pathogenic | 0.9387 | pathogenic | -1.593 | Destabilizing | 0.999 | D | 0.795 | deleterious | N | 0.496986022 | None | None | N |
I/P | 0.9935 | likely_pathogenic | 0.9942 | pathogenic | -0.762 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
I/Q | 0.9798 | likely_pathogenic | 0.9775 | pathogenic | -1.284 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
I/R | 0.9764 | likely_pathogenic | 0.9692 | pathogenic | -1.243 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
I/S | 0.9621 | likely_pathogenic | 0.959 | pathogenic | -2.262 | Highly Destabilizing | 0.998 | D | 0.705 | prob.neutral | N | 0.493676358 | None | None | N |
I/T | 0.9193 | likely_pathogenic | 0.9098 | pathogenic | -1.806 | Destabilizing | 0.989 | D | 0.645 | neutral | N | 0.476840036 | None | None | N |
I/V | 0.1677 | likely_benign | 0.1573 | benign | -0.762 | Destabilizing | 0.333 | N | 0.234 | neutral | N | 0.440287377 | None | None | N |
I/W | 0.9936 | likely_pathogenic | 0.992 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/Y | 0.972 | likely_pathogenic | 0.9656 | pathogenic | -1.102 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.