Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32959 | 99100;99101;99102 | chr2:178539060;178539059;178539058 | chr2:179403787;179403786;179403785 |
N2AB | 31318 | 94177;94178;94179 | chr2:178539060;178539059;178539058 | chr2:179403787;179403786;179403785 |
N2A | 30391 | 91396;91397;91398 | chr2:178539060;178539059;178539058 | chr2:179403787;179403786;179403785 |
N2B | 23894 | 71905;71906;71907 | chr2:178539060;178539059;178539058 | chr2:179403787;179403786;179403785 |
Novex-1 | 24019 | 72280;72281;72282 | chr2:178539060;178539059;178539058 | chr2:179403787;179403786;179403785 |
Novex-2 | 24086 | 72481;72482;72483 | chr2:178539060;178539059;178539058 | chr2:179403787;179403786;179403785 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.003 | N | 0.289 | 0.122 | 0.336400405673 | gnomAD-4.0.0 | 8.40225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7809 | likely_pathogenic | 0.7516 | pathogenic | -1.787 | Destabilizing | 0.722 | D | 0.659 | neutral | N | 0.475201262 | None | None | N |
V/C | 0.957 | likely_pathogenic | 0.9487 | pathogenic | -1.548 | Destabilizing | 0.996 | D | 0.756 | deleterious | None | None | None | None | N |
V/D | 0.9955 | likely_pathogenic | 0.9939 | pathogenic | -2.325 | Highly Destabilizing | 0.983 | D | 0.817 | deleterious | N | 0.491988844 | None | None | N |
V/E | 0.9826 | likely_pathogenic | 0.9769 | pathogenic | -2.035 | Highly Destabilizing | 0.987 | D | 0.802 | deleterious | None | None | None | None | N |
V/F | 0.7862 | likely_pathogenic | 0.7666 | pathogenic | -1.076 | Destabilizing | 0.901 | D | 0.779 | deleterious | N | 0.503594958 | None | None | N |
V/G | 0.9586 | likely_pathogenic | 0.9478 | pathogenic | -2.388 | Highly Destabilizing | 0.949 | D | 0.815 | deleterious | D | 0.539326623 | None | None | N |
V/H | 0.9944 | likely_pathogenic | 0.9927 | pathogenic | -2.338 | Highly Destabilizing | 0.996 | D | 0.812 | deleterious | None | None | None | None | N |
V/I | 0.0915 | likely_benign | 0.0925 | benign | -0.075 | Destabilizing | 0.008 | N | 0.227 | neutral | N | 0.483601011 | None | None | N |
V/K | 0.9886 | likely_pathogenic | 0.9849 | pathogenic | -1.403 | Destabilizing | 0.961 | D | 0.802 | deleterious | None | None | None | None | N |
V/L | 0.3476 | ambiguous | 0.3421 | ambiguous | -0.075 | Destabilizing | 0.003 | N | 0.289 | neutral | N | 0.492254993 | None | None | N |
V/M | 0.4968 | ambiguous | 0.4885 | ambiguous | -0.335 | Destabilizing | 0.923 | D | 0.667 | neutral | None | None | None | None | N |
V/N | 0.9837 | likely_pathogenic | 0.9777 | pathogenic | -1.912 | Destabilizing | 0.987 | D | 0.833 | deleterious | None | None | None | None | N |
V/P | 0.992 | likely_pathogenic | 0.9903 | pathogenic | -0.621 | Destabilizing | 0.987 | D | 0.789 | deleterious | None | None | None | None | N |
V/Q | 0.9804 | likely_pathogenic | 0.9733 | pathogenic | -1.583 | Destabilizing | 0.987 | D | 0.809 | deleterious | None | None | None | None | N |
V/R | 0.9843 | likely_pathogenic | 0.978 | pathogenic | -1.605 | Destabilizing | 0.961 | D | 0.824 | deleterious | None | None | None | None | N |
V/S | 0.9569 | likely_pathogenic | 0.9429 | pathogenic | -2.56 | Highly Destabilizing | 0.961 | D | 0.785 | deleterious | None | None | None | None | N |
V/T | 0.8776 | likely_pathogenic | 0.8426 | pathogenic | -2.087 | Highly Destabilizing | 0.775 | D | 0.686 | prob.neutral | None | None | None | None | N |
V/W | 0.9964 | likely_pathogenic | 0.9956 | pathogenic | -1.572 | Destabilizing | 0.996 | D | 0.799 | deleterious | None | None | None | None | N |
V/Y | 0.9853 | likely_pathogenic | 0.9818 | pathogenic | -1.147 | Destabilizing | 0.961 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.