Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC329610111;10112;10113 chr2:178764629;178764628;178764627chr2:179629356;179629355;179629354
N2AB329610111;10112;10113 chr2:178764629;178764628;178764627chr2:179629356;179629355;179629354
N2A329610111;10112;10113 chr2:178764629;178764628;178764627chr2:179629356;179629355;179629354
N2B32509973;9974;9975 chr2:178764629;178764628;178764627chr2:179629356;179629355;179629354
Novex-132509973;9974;9975 chr2:178764629;178764628;178764627chr2:179629356;179629355;179629354
Novex-232509973;9974;9975 chr2:178764629;178764628;178764627chr2:179629356;179629355;179629354
Novex-3329610111;10112;10113 chr2:178764629;178764628;178764627chr2:179629356;179629355;179629354

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-23
  • Domain position: 58
  • Structural Position: 138
  • Q(SASA): 0.0802
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs1449589213 -1.599 0.993 D 0.761 0.614 0.87793777064 gnomAD-2.1.1 3.98E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.82E-06 0
L/F rs1449589213 -1.599 0.993 D 0.761 0.614 0.87793777064 gnomAD-4.0.0 3.18099E-06 None None None None N None 0 0 None 0 0 None 0 0 2.85647E-06 1.43275E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.9624 likely_pathogenic 0.9787 pathogenic -2.028 Highly Destabilizing 0.983 D 0.759 deleterious None None None None N
L/C 0.9544 likely_pathogenic 0.9724 pathogenic -1.224 Destabilizing 1.0 D 0.841 deleterious None None None None N
L/D 0.9999 likely_pathogenic 0.9999 pathogenic -2.745 Highly Destabilizing 0.999 D 0.908 deleterious None None None None N
L/E 0.9989 likely_pathogenic 0.9993 pathogenic -2.458 Highly Destabilizing 0.998 D 0.889 deleterious None None None None N
L/F 0.6808 likely_pathogenic 0.8398 pathogenic -1.277 Destabilizing 0.993 D 0.761 deleterious D 0.658930233 None None N
L/G 0.9954 likely_pathogenic 0.9975 pathogenic -2.537 Highly Destabilizing 0.998 D 0.885 deleterious None None None None N
L/H 0.9949 likely_pathogenic 0.9977 pathogenic -2.569 Highly Destabilizing 1.0 D 0.897 deleterious D 0.74665194 None None N
L/I 0.4276 ambiguous 0.5567 ambiguous -0.48 Destabilizing 0.955 D 0.663 neutral D 0.655865731 None None N
L/K 0.9976 likely_pathogenic 0.9985 pathogenic -1.516 Destabilizing 0.998 D 0.884 deleterious None None None None N
L/M 0.4463 ambiguous 0.5991 pathogenic -0.802 Destabilizing 0.921 D 0.589 neutral None None None None N
L/N 0.9988 likely_pathogenic 0.9992 pathogenic -2.265 Highly Destabilizing 0.999 D 0.907 deleterious None None None None N
L/P 0.999 likely_pathogenic 0.9995 pathogenic -0.991 Destabilizing 0.999 D 0.905 deleterious D 0.779391457 None None N
L/Q 0.9926 likely_pathogenic 0.9967 pathogenic -1.828 Destabilizing 0.998 D 0.904 deleterious None None None None N
L/R 0.9927 likely_pathogenic 0.9959 pathogenic -1.93 Destabilizing 0.997 D 0.889 deleterious D 0.712311624 None None N
L/S 0.9965 likely_pathogenic 0.9985 pathogenic -2.574 Highly Destabilizing 0.998 D 0.883 deleterious None None None None N
L/T 0.9898 likely_pathogenic 0.9949 pathogenic -2.134 Highly Destabilizing 0.995 D 0.801 deleterious None None None None N
L/V 0.4215 ambiguous 0.5853 pathogenic -0.991 Destabilizing 0.955 D 0.686 prob.neutral D 0.632333419 None None N
L/W 0.9833 likely_pathogenic 0.9941 pathogenic -1.559 Destabilizing 1.0 D 0.871 deleterious None None None None N
L/Y 0.9831 likely_pathogenic 0.9926 pathogenic -1.427 Destabilizing 0.998 D 0.845 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.