Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32961 | 99106;99107;99108 | chr2:178539054;178539053;178539052 | chr2:179403781;179403780;179403779 |
N2AB | 31320 | 94183;94184;94185 | chr2:178539054;178539053;178539052 | chr2:179403781;179403780;179403779 |
N2A | 30393 | 91402;91403;91404 | chr2:178539054;178539053;178539052 | chr2:179403781;179403780;179403779 |
N2B | 23896 | 71911;71912;71913 | chr2:178539054;178539053;178539052 | chr2:179403781;179403780;179403779 |
Novex-1 | 24021 | 72286;72287;72288 | chr2:178539054;178539053;178539052 | chr2:179403781;179403780;179403779 |
Novex-2 | 24088 | 72487;72488;72489 | chr2:178539054;178539053;178539052 | chr2:179403781;179403780;179403779 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs1225559660 | -0.46 | 1.0 | N | 0.768 | 0.508 | 0.515995215087 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
G/E | rs1225559660 | -0.46 | 1.0 | N | 0.768 | 0.508 | 0.515995215087 | gnomAD-4.0.0 | 3.18268E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86558E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4544 | ambiguous | 0.4724 | ambiguous | -0.217 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | N | 0.50164272 | None | None | N |
G/C | 0.7291 | likely_pathogenic | 0.7411 | pathogenic | -0.746 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
G/D | 0.7423 | likely_pathogenic | 0.7709 | pathogenic | -0.552 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
G/E | 0.8398 | likely_pathogenic | 0.8597 | pathogenic | -0.718 | Destabilizing | 1.0 | D | 0.768 | deleterious | N | 0.472155706 | None | None | N |
G/F | 0.9595 | likely_pathogenic | 0.9693 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
G/H | 0.8762 | likely_pathogenic | 0.9055 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
G/I | 0.9321 | likely_pathogenic | 0.9438 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
G/K | 0.9467 | likely_pathogenic | 0.9564 | pathogenic | -0.723 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
G/L | 0.9177 | likely_pathogenic | 0.9303 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
G/M | 0.9164 | likely_pathogenic | 0.93 | pathogenic | -0.393 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
G/N | 0.6145 | likely_pathogenic | 0.6478 | pathogenic | -0.303 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
G/P | 0.9911 | likely_pathogenic | 0.9927 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
G/Q | 0.8407 | likely_pathogenic | 0.8649 | pathogenic | -0.599 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
G/R | 0.8893 | likely_pathogenic | 0.9101 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.796 | deleterious | N | 0.470523092 | None | None | N |
G/S | 0.2645 | likely_benign | 0.2924 | benign | -0.435 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
G/T | 0.6659 | likely_pathogenic | 0.6959 | pathogenic | -0.532 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
G/V | 0.8611 | likely_pathogenic | 0.8814 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.771 | deleterious | D | 0.529154724 | None | None | N |
G/W | 0.9316 | likely_pathogenic | 0.9464 | pathogenic | -1.165 | Destabilizing | 1.0 | D | 0.742 | deleterious | D | 0.529408214 | None | None | N |
G/Y | 0.9263 | likely_pathogenic | 0.9417 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.