Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32972 | 99139;99140;99141 | chr2:178539021;178539020;178539019 | chr2:179403748;179403747;179403746 |
N2AB | 31331 | 94216;94217;94218 | chr2:178539021;178539020;178539019 | chr2:179403748;179403747;179403746 |
N2A | 30404 | 91435;91436;91437 | chr2:178539021;178539020;178539019 | chr2:179403748;179403747;179403746 |
N2B | 23907 | 71944;71945;71946 | chr2:178539021;178539020;178539019 | chr2:179403748;179403747;179403746 |
Novex-1 | 24032 | 72319;72320;72321 | chr2:178539021;178539020;178539019 | chr2:179403748;179403747;179403746 |
Novex-2 | 24099 | 72520;72521;72522 | chr2:178539021;178539020;178539019 | chr2:179403748;179403747;179403746 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.896 | D | 0.531 | 0.448 | 0.706878895572 | gnomAD-4.0.0 | 1.5914E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85871E-06 | 0 | 0 |
I/V | None | None | 0.004 | N | 0.23 | 0.082 | 0.167679373172 | gnomAD-4.0.0 | 1.36846E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79902E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9484 | likely_pathogenic | 0.9262 | pathogenic | -2.886 | Highly Destabilizing | 0.702 | D | 0.579 | neutral | None | None | None | None | N |
I/C | 0.9484 | likely_pathogenic | 0.9313 | pathogenic | -2.246 | Highly Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
I/D | 0.999 | likely_pathogenic | 0.9981 | pathogenic | -3.645 | Highly Destabilizing | 0.996 | D | 0.847 | deleterious | None | None | None | None | N |
I/E | 0.9973 | likely_pathogenic | 0.9956 | pathogenic | -3.355 | Highly Destabilizing | 0.988 | D | 0.824 | deleterious | None | None | None | None | N |
I/F | 0.8384 | likely_pathogenic | 0.7948 | pathogenic | -1.577 | Destabilizing | 0.968 | D | 0.675 | neutral | N | 0.479516448 | None | None | N |
I/G | 0.9929 | likely_pathogenic | 0.987 | pathogenic | -3.46 | Highly Destabilizing | 0.988 | D | 0.793 | deleterious | None | None | None | None | N |
I/H | 0.9976 | likely_pathogenic | 0.9959 | pathogenic | -3.038 | Highly Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
I/K | 0.9965 | likely_pathogenic | 0.9944 | pathogenic | -2.225 | Highly Destabilizing | 0.988 | D | 0.829 | deleterious | None | None | None | None | N |
I/L | 0.4379 | ambiguous | 0.4107 | ambiguous | -1.166 | Destabilizing | 0.437 | N | 0.341 | neutral | N | 0.462340304 | None | None | N |
I/M | 0.4613 | ambiguous | 0.4058 | ambiguous | -1.406 | Destabilizing | 0.984 | D | 0.669 | neutral | N | 0.500034688 | None | None | N |
I/N | 0.9823 | likely_pathogenic | 0.9697 | pathogenic | -2.822 | Highly Destabilizing | 0.995 | D | 0.851 | deleterious | N | 0.498381172 | None | None | N |
I/P | 0.9959 | likely_pathogenic | 0.9944 | pathogenic | -1.729 | Destabilizing | 0.996 | D | 0.847 | deleterious | None | None | None | None | N |
I/Q | 0.9958 | likely_pathogenic | 0.9931 | pathogenic | -2.545 | Highly Destabilizing | 0.996 | D | 0.849 | deleterious | None | None | None | None | N |
I/R | 0.9943 | likely_pathogenic | 0.9909 | pathogenic | -2.101 | Highly Destabilizing | 0.988 | D | 0.855 | deleterious | None | None | None | None | N |
I/S | 0.9737 | likely_pathogenic | 0.955 | pathogenic | -3.394 | Highly Destabilizing | 0.984 | D | 0.754 | deleterious | N | 0.487024866 | None | None | N |
I/T | 0.9464 | likely_pathogenic | 0.9227 | pathogenic | -2.958 | Highly Destabilizing | 0.896 | D | 0.531 | neutral | D | 0.527952008 | None | None | N |
I/V | 0.0983 | likely_benign | 0.0855 | benign | -1.729 | Destabilizing | 0.004 | N | 0.23 | neutral | N | 0.326003787 | None | None | N |
I/W | 0.9979 | likely_pathogenic | 0.9964 | pathogenic | -2.046 | Highly Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | N |
I/Y | 0.9868 | likely_pathogenic | 0.9812 | pathogenic | -1.856 | Destabilizing | 0.988 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.