Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32980 | 99163;99164;99165 | chr2:178538997;178538996;178538995 | chr2:179403724;179403723;179403722 |
N2AB | 31339 | 94240;94241;94242 | chr2:178538997;178538996;178538995 | chr2:179403724;179403723;179403722 |
N2A | 30412 | 91459;91460;91461 | chr2:178538997;178538996;178538995 | chr2:179403724;179403723;179403722 |
N2B | 23915 | 71968;71969;71970 | chr2:178538997;178538996;178538995 | chr2:179403724;179403723;179403722 |
Novex-1 | 24040 | 72343;72344;72345 | chr2:178538997;178538996;178538995 | chr2:179403724;179403723;179403722 |
Novex-2 | 24107 | 72544;72545;72546 | chr2:178538997;178538996;178538995 | chr2:179403724;179403723;179403722 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.966 | N | 0.688 | 0.319 | 0.776386403144 | gnomAD-4.0.0 | 4.77789E-06 | None | None | None | None | N | None | 0 | 2.28697E-05 | None | 0 | 0 | None | 0 | 0 | 5.72384E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3192 | likely_benign | 0.3122 | benign | -1.587 | Destabilizing | 0.688 | D | 0.493 | neutral | None | None | None | None | N |
L/C | 0.6534 | likely_pathogenic | 0.6137 | pathogenic | -0.955 | Destabilizing | 0.998 | D | 0.604 | neutral | None | None | None | None | N |
L/D | 0.718 | likely_pathogenic | 0.6702 | pathogenic | -0.756 | Destabilizing | 0.728 | D | 0.635 | neutral | None | None | None | None | N |
L/E | 0.3088 | likely_benign | 0.2554 | benign | -0.773 | Destabilizing | 0.016 | N | 0.472 | neutral | None | None | None | None | N |
L/F | 0.1894 | likely_benign | 0.2002 | benign | -1.149 | Destabilizing | 0.991 | D | 0.606 | neutral | None | None | None | None | N |
L/G | 0.7057 | likely_pathogenic | 0.6988 | pathogenic | -1.887 | Destabilizing | 0.842 | D | 0.652 | neutral | None | None | None | None | N |
L/H | 0.3855 | ambiguous | 0.3559 | ambiguous | -0.966 | Destabilizing | 0.974 | D | 0.677 | prob.neutral | None | None | None | None | N |
L/I | 0.1025 | likely_benign | 0.0989 | benign | -0.851 | Destabilizing | 0.915 | D | 0.49 | neutral | None | None | None | None | N |
L/K | 0.3558 | ambiguous | 0.3045 | benign | -0.915 | Destabilizing | 0.728 | D | 0.605 | neutral | None | None | None | None | N |
L/M | 0.1299 | likely_benign | 0.1297 | benign | -0.655 | Destabilizing | 0.989 | D | 0.611 | neutral | N | 0.450333799 | None | None | N |
L/N | 0.4213 | ambiguous | 0.4248 | ambiguous | -0.682 | Destabilizing | 0.949 | D | 0.665 | neutral | None | None | None | None | N |
L/P | 0.3616 | ambiguous | 0.3997 | ambiguous | -1.064 | Destabilizing | 0.966 | D | 0.688 | prob.neutral | N | 0.435980422 | None | None | N |
L/Q | 0.1816 | likely_benign | 0.1683 | benign | -0.902 | Destabilizing | 0.136 | N | 0.433 | neutral | N | 0.418509382 | None | None | N |
L/R | 0.3655 | ambiguous | 0.3242 | benign | -0.285 | Destabilizing | 0.801 | D | 0.655 | neutral | N | 0.409871256 | None | None | N |
L/S | 0.3841 | ambiguous | 0.3671 | ambiguous | -1.345 | Destabilizing | 0.842 | D | 0.604 | neutral | None | None | None | None | N |
L/T | 0.2722 | likely_benign | 0.2475 | benign | -1.246 | Destabilizing | 0.842 | D | 0.574 | neutral | None | None | None | None | N |
L/V | 0.1124 | likely_benign | 0.1088 | benign | -1.064 | Destabilizing | 0.891 | D | 0.449 | neutral | N | 0.423800559 | None | None | N |
L/W | 0.4213 | ambiguous | 0.4117 | ambiguous | -1.135 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/Y | 0.4531 | ambiguous | 0.4639 | ambiguous | -0.932 | Destabilizing | 0.991 | D | 0.62 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.