Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32982 | 99169;99170;99171 | chr2:178538991;178538990;178538989 | chr2:179403718;179403717;179403716 |
N2AB | 31341 | 94246;94247;94248 | chr2:178538991;178538990;178538989 | chr2:179403718;179403717;179403716 |
N2A | 30414 | 91465;91466;91467 | chr2:178538991;178538990;178538989 | chr2:179403718;179403717;179403716 |
N2B | 23917 | 71974;71975;71976 | chr2:178538991;178538990;178538989 | chr2:179403718;179403717;179403716 |
Novex-1 | 24042 | 72349;72350;72351 | chr2:178538991;178538990;178538989 | chr2:179403718;179403717;179403716 |
Novex-2 | 24109 | 72550;72551;72552 | chr2:178538991;178538990;178538989 | chr2:179403718;179403717;179403716 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 1.0 | N | 0.687 | 0.297 | 0.317958651998 | gnomAD-4.0.0 | 1.59312E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43345E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2804 | likely_benign | 0.2612 | benign | -0.433 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | N | 0.520308386 | None | None | N |
E/C | 0.9434 | likely_pathogenic | 0.9332 | pathogenic | None | Stabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/D | 0.1142 | likely_benign | 0.134 | benign | -0.315 | Destabilizing | 0.999 | D | 0.553 | neutral | N | 0.44558134 | None | None | N |
E/F | 0.9252 | likely_pathogenic | 0.9112 | pathogenic | -0.336 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/G | 0.2728 | likely_benign | 0.2462 | benign | -0.616 | Destabilizing | 1.0 | D | 0.67 | neutral | N | 0.476128498 | None | None | N |
E/H | 0.7153 | likely_pathogenic | 0.7048 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
E/I | 0.6827 | likely_pathogenic | 0.6583 | pathogenic | 0.011 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/K | 0.2521 | likely_benign | 0.2149 | benign | 0.363 | Stabilizing | 0.999 | D | 0.664 | neutral | N | 0.514825208 | None | None | N |
E/L | 0.6745 | likely_pathogenic | 0.6563 | pathogenic | 0.011 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/M | 0.7466 | likely_pathogenic | 0.7166 | pathogenic | 0.162 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
E/N | 0.345 | ambiguous | 0.3412 | ambiguous | 0.026 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/P | 0.5591 | ambiguous | 0.5781 | pathogenic | -0.118 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/Q | 0.2541 | likely_benign | 0.2389 | benign | 0.062 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.511323543 | None | None | N |
E/R | 0.4516 | ambiguous | 0.4124 | ambiguous | 0.533 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/S | 0.3123 | likely_benign | 0.2998 | benign | -0.118 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/T | 0.4232 | ambiguous | 0.4032 | ambiguous | 0.037 | Stabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/V | 0.4548 | ambiguous | 0.4264 | ambiguous | -0.118 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.472889722 | None | None | N |
E/W | 0.9749 | likely_pathogenic | 0.9712 | pathogenic | -0.18 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/Y | 0.8525 | likely_pathogenic | 0.8389 | pathogenic | -0.092 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.