Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32984 | 99175;99176;99177 | chr2:178538985;178538984;178538983 | chr2:179403712;179403711;179403710 |
N2AB | 31343 | 94252;94253;94254 | chr2:178538985;178538984;178538983 | chr2:179403712;179403711;179403710 |
N2A | 30416 | 91471;91472;91473 | chr2:178538985;178538984;178538983 | chr2:179403712;179403711;179403710 |
N2B | 23919 | 71980;71981;71982 | chr2:178538985;178538984;178538983 | chr2:179403712;179403711;179403710 |
Novex-1 | 24044 | 72355;72356;72357 | chr2:178538985;178538984;178538983 | chr2:179403712;179403711;179403710 |
Novex-2 | 24111 | 72556;72557;72558 | chr2:178538985;178538984;178538983 | chr2:179403712;179403711;179403710 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.998 | N | 0.861 | 0.594 | 0.497152477365 | gnomAD-4.0.0 | 6.84894E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00471E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3345 | likely_benign | 0.2959 | benign | -0.759 | Destabilizing | 0.871 | D | 0.663 | neutral | None | None | None | None | N |
S/C | 0.4198 | ambiguous | 0.3462 | ambiguous | -0.825 | Destabilizing | 1.0 | D | 0.83 | deleterious | D | 0.545167925 | None | None | N |
S/D | 0.9859 | likely_pathogenic | 0.9765 | pathogenic | -1.642 | Destabilizing | 0.985 | D | 0.793 | deleterious | None | None | None | None | N |
S/E | 0.9911 | likely_pathogenic | 0.9855 | pathogenic | -1.535 | Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
S/F | 0.9652 | likely_pathogenic | 0.9432 | pathogenic | -0.6 | Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
S/G | 0.2181 | likely_benign | 0.1824 | benign | -1.086 | Destabilizing | 0.011 | N | 0.492 | neutral | D | 0.525848357 | None | None | N |
S/H | 0.9668 | likely_pathogenic | 0.9473 | pathogenic | -1.484 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
S/I | 0.9011 | likely_pathogenic | 0.8398 | pathogenic | 0.038 | Stabilizing | 0.998 | D | 0.881 | deleterious | D | 0.526556691 | None | None | N |
S/K | 0.9977 | likely_pathogenic | 0.9958 | pathogenic | -0.854 | Destabilizing | 0.985 | D | 0.801 | deleterious | None | None | None | None | N |
S/L | 0.7846 | likely_pathogenic | 0.7198 | pathogenic | 0.038 | Stabilizing | 0.985 | D | 0.865 | deleterious | None | None | None | None | N |
S/M | 0.8824 | likely_pathogenic | 0.8474 | pathogenic | 0.078 | Stabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
S/N | 0.8635 | likely_pathogenic | 0.8077 | pathogenic | -1.269 | Destabilizing | 0.98 | D | 0.797 | deleterious | D | 0.544407456 | None | None | N |
S/P | 0.9707 | likely_pathogenic | 0.9563 | pathogenic | -0.194 | Destabilizing | 0.999 | D | 0.856 | deleterious | None | None | None | None | N |
S/Q | 0.981 | likely_pathogenic | 0.9719 | pathogenic | -1.247 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
S/R | 0.9953 | likely_pathogenic | 0.9894 | pathogenic | -0.912 | Destabilizing | 0.998 | D | 0.861 | deleterious | N | 0.507438478 | None | None | N |
S/T | 0.3898 | ambiguous | 0.3534 | ambiguous | -0.998 | Destabilizing | 0.98 | D | 0.794 | deleterious | N | 0.499574438 | None | None | N |
S/V | 0.8624 | likely_pathogenic | 0.8048 | pathogenic | -0.194 | Destabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | N |
S/W | 0.9799 | likely_pathogenic | 0.9639 | pathogenic | -0.783 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
S/Y | 0.9556 | likely_pathogenic | 0.9223 | pathogenic | -0.418 | Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.