Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32988 | 99187;99188;99189 | chr2:178538973;178538972;178538971 | chr2:179403700;179403699;179403698 |
N2AB | 31347 | 94264;94265;94266 | chr2:178538973;178538972;178538971 | chr2:179403700;179403699;179403698 |
N2A | 30420 | 91483;91484;91485 | chr2:178538973;178538972;178538971 | chr2:179403700;179403699;179403698 |
N2B | 23923 | 71992;71993;71994 | chr2:178538973;178538972;178538971 | chr2:179403700;179403699;179403698 |
Novex-1 | 24048 | 72367;72368;72369 | chr2:178538973;178538972;178538971 | chr2:179403700;179403699;179403698 |
Novex-2 | 24115 | 72568;72569;72570 | chr2:178538973;178538972;178538971 | chr2:179403700;179403699;179403698 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1358375083 | None | 0.058 | N | 0.277 | 0.035 | 0.107399877778 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1358375083 | None | 0.058 | N | 0.277 | 0.035 | 0.107399877778 | gnomAD-4.0.0 | 6.57108E-06 | None | None | None | None | I | None | 2.41324E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2648 | likely_benign | 0.22 | benign | -0.205 | Destabilizing | 0.952 | D | 0.721 | deleterious | N | 0.472455724 | None | None | I |
E/C | 0.9356 | likely_pathogenic | 0.9028 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
E/D | 0.0899 | likely_benign | 0.0874 | benign | -0.228 | Destabilizing | 0.058 | N | 0.277 | neutral | N | 0.391821426 | None | None | I |
E/F | 0.8753 | likely_pathogenic | 0.816 | pathogenic | -0.138 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
E/G | 0.296 | likely_benign | 0.2388 | benign | -0.359 | Destabilizing | 0.986 | D | 0.659 | prob.neutral | N | 0.472399795 | None | None | I |
E/H | 0.7109 | likely_pathogenic | 0.6221 | pathogenic | 0.372 | Stabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | I |
E/I | 0.546 | ambiguous | 0.4505 | ambiguous | 0.152 | Stabilizing | 0.995 | D | 0.82 | deleterious | None | None | None | None | I |
E/K | 0.2859 | likely_benign | 0.2035 | benign | 0.304 | Stabilizing | 0.952 | D | 0.646 | neutral | N | 0.47682418 | None | None | I |
E/L | 0.5279 | ambiguous | 0.4508 | ambiguous | 0.152 | Stabilizing | 0.995 | D | 0.763 | deleterious | None | None | None | None | I |
E/M | 0.6447 | likely_pathogenic | 0.5663 | pathogenic | 0.024 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
E/N | 0.3378 | likely_benign | 0.2741 | benign | 0.054 | Stabilizing | 0.979 | D | 0.768 | deleterious | None | None | None | None | I |
E/P | 0.5696 | likely_pathogenic | 0.4941 | ambiguous | 0.052 | Stabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | I |
E/Q | 0.2514 | likely_benign | 0.2081 | benign | 0.076 | Stabilizing | 0.993 | D | 0.733 | deleterious | N | 0.477170897 | None | None | I |
E/R | 0.4924 | ambiguous | 0.3917 | ambiguous | 0.587 | Stabilizing | 0.995 | D | 0.785 | deleterious | None | None | None | None | I |
E/S | 0.2765 | likely_benign | 0.2299 | benign | -0.125 | Destabilizing | 0.963 | D | 0.661 | prob.neutral | None | None | None | None | I |
E/T | 0.3609 | ambiguous | 0.3018 | benign | 0.004 | Stabilizing | 0.995 | D | 0.765 | deleterious | None | None | None | None | I |
E/V | 0.3576 | ambiguous | 0.29 | benign | 0.052 | Stabilizing | 0.993 | D | 0.753 | deleterious | N | 0.502759988 | None | None | I |
E/W | 0.9681 | likely_pathogenic | 0.9491 | pathogenic | -0.033 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
E/Y | 0.7878 | likely_pathogenic | 0.7074 | pathogenic | 0.094 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.