Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32989 | 99190;99191;99192 | chr2:178538970;178538969;178538968 | chr2:179403697;179403696;179403695 |
N2AB | 31348 | 94267;94268;94269 | chr2:178538970;178538969;178538968 | chr2:179403697;179403696;179403695 |
N2A | 30421 | 91486;91487;91488 | chr2:178538970;178538969;178538968 | chr2:179403697;179403696;179403695 |
N2B | 23924 | 71995;71996;71997 | chr2:178538970;178538969;178538968 | chr2:179403697;179403696;179403695 |
Novex-1 | 24049 | 72370;72371;72372 | chr2:178538970;178538969;178538968 | chr2:179403697;179403696;179403695 |
Novex-2 | 24116 | 72571;72572;72573 | chr2:178538970;178538969;178538968 | chr2:179403697;179403696;179403695 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs779521662 | -0.647 | 0.702 | N | 0.523 | 0.226 | 0.233150807113 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14784E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/A | rs779521662 | -0.647 | 0.702 | N | 0.523 | 0.226 | 0.233150807113 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/A | rs779521662 | -0.647 | 0.702 | N | 0.523 | 0.226 | 0.233150807113 | gnomAD-4.0.0 | 6.57384E-06 | None | None | None | None | N | None | 2.41383E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs757583081 | -0.214 | 0.958 | N | 0.729 | 0.371 | 0.675014312329 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.69E-05 | 0 |
P/L | rs757583081 | -0.214 | 0.958 | N | 0.729 | 0.371 | 0.675014312329 | gnomAD-4.0.0 | 2.95234E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.79186E-05 | 0 | 1.66362E-05 |
P/R | None | None | 0.988 | N | 0.759 | 0.385 | 0.558188439259 | gnomAD-4.0.0 | 6.86591E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02824E-07 | 0 | 0 |
P/S | rs779521662 | None | 0.157 | N | 0.305 | 0.237 | 0.177238962908 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.0018E-04 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs779521662 | None | 0.157 | N | 0.305 | 0.237 | 0.177238962908 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 5.77034E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs779521662 | None | 0.157 | N | 0.305 | 0.237 | 0.177238962908 | gnomAD-4.0.0 | 3.86311E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.23062E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.065 | likely_benign | 0.0676 | benign | -0.956 | Destabilizing | 0.702 | D | 0.523 | neutral | N | 0.487790535 | None | None | N |
P/C | 0.5172 | ambiguous | 0.4977 | ambiguous | -0.694 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
P/D | 0.532 | ambiguous | 0.5083 | ambiguous | -0.82 | Destabilizing | 0.938 | D | 0.617 | neutral | None | None | None | None | N |
P/E | 0.382 | ambiguous | 0.3645 | ambiguous | -0.919 | Destabilizing | 0.938 | D | 0.612 | neutral | None | None | None | None | N |
P/F | 0.5724 | likely_pathogenic | 0.5576 | ambiguous | -1.012 | Destabilizing | 0.997 | D | 0.847 | deleterious | None | None | None | None | N |
P/G | 0.3326 | likely_benign | 0.3295 | benign | -1.147 | Destabilizing | 0.938 | D | 0.617 | neutral | None | None | None | None | N |
P/H | 0.2721 | likely_benign | 0.2614 | benign | -0.643 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
P/I | 0.2976 | likely_benign | 0.2899 | benign | -0.581 | Destabilizing | 0.991 | D | 0.818 | deleterious | None | None | None | None | N |
P/K | 0.3724 | ambiguous | 0.3513 | ambiguous | -0.808 | Destabilizing | 0.938 | D | 0.621 | neutral | None | None | None | None | N |
P/L | 0.1318 | likely_benign | 0.1323 | benign | -0.581 | Destabilizing | 0.958 | D | 0.729 | deleterious | N | 0.515361139 | None | None | N |
P/M | 0.2942 | likely_benign | 0.3053 | benign | -0.396 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
P/N | 0.3266 | likely_benign | 0.3309 | benign | -0.499 | Destabilizing | 0.981 | D | 0.673 | prob.neutral | None | None | None | None | N |
P/Q | 0.223 | likely_benign | 0.2161 | benign | -0.794 | Destabilizing | 0.988 | D | 0.639 | neutral | N | 0.467695027 | None | None | N |
P/R | 0.2634 | likely_benign | 0.2453 | benign | -0.173 | Destabilizing | 0.988 | D | 0.759 | deleterious | N | 0.473126304 | None | None | N |
P/S | 0.1375 | likely_benign | 0.1366 | benign | -0.896 | Destabilizing | 0.157 | N | 0.305 | neutral | N | 0.484115512 | None | None | N |
P/T | 0.1032 | likely_benign | 0.1044 | benign | -0.898 | Destabilizing | 0.851 | D | 0.554 | neutral | N | 0.519228163 | None | None | N |
P/V | 0.1878 | likely_benign | 0.1874 | benign | -0.671 | Destabilizing | 0.991 | D | 0.672 | prob.neutral | None | None | None | None | N |
P/W | 0.7657 | likely_pathogenic | 0.7337 | pathogenic | -1.079 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
P/Y | 0.5402 | ambiguous | 0.5279 | ambiguous | -0.809 | Destabilizing | 0.997 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.