Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32991 | 99196;99197;99198 | chr2:178538964;178538963;178538962 | chr2:179403691;179403690;179403689 |
N2AB | 31350 | 94273;94274;94275 | chr2:178538964;178538963;178538962 | chr2:179403691;179403690;179403689 |
N2A | 30423 | 91492;91493;91494 | chr2:178538964;178538963;178538962 | chr2:179403691;179403690;179403689 |
N2B | 23926 | 72001;72002;72003 | chr2:178538964;178538963;178538962 | chr2:179403691;179403690;179403689 |
Novex-1 | 24051 | 72376;72377;72378 | chr2:178538964;178538963;178538962 | chr2:179403691;179403690;179403689 |
Novex-2 | 24118 | 72577;72578;72579 | chr2:178538964;178538963;178538962 | chr2:179403691;179403690;179403689 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1416459734 | None | 0.012 | N | 0.189 | 0.062 | 0.284150004643 | gnomAD-4.0.0 | 3.2118E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.79153E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2289 | likely_benign | 0.2649 | benign | -1.115 | Destabilizing | 0.792 | D | 0.434 | neutral | N | 0.459467784 | None | None | I |
V/C | 0.7022 | likely_pathogenic | 0.7217 | pathogenic | -0.738 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | I |
V/D | 0.5437 | ambiguous | 0.6019 | pathogenic | -0.945 | Destabilizing | 0.988 | D | 0.838 | deleterious | N | 0.512243476 | None | None | I |
V/E | 0.405 | ambiguous | 0.4467 | ambiguous | -1.009 | Destabilizing | 0.991 | D | 0.791 | deleterious | None | None | None | None | I |
V/F | 0.1696 | likely_benign | 0.1862 | benign | -1.0 | Destabilizing | 0.931 | D | 0.683 | prob.neutral | N | 0.468703342 | None | None | I |
V/G | 0.3657 | ambiguous | 0.4272 | ambiguous | -1.355 | Destabilizing | 0.964 | D | 0.816 | deleterious | N | 0.467819931 | None | None | I |
V/H | 0.5679 | likely_pathogenic | 0.6126 | pathogenic | -0.854 | Destabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | I |
V/I | 0.0647 | likely_benign | 0.0649 | benign | -0.588 | Destabilizing | 0.012 | N | 0.189 | neutral | N | 0.461353296 | None | None | I |
V/K | 0.3652 | ambiguous | 0.3889 | ambiguous | -0.989 | Destabilizing | 0.973 | D | 0.791 | deleterious | None | None | None | None | I |
V/L | 0.1271 | likely_benign | 0.1419 | benign | -0.588 | Destabilizing | 0.214 | N | 0.49 | neutral | N | 0.41844788 | None | None | I |
V/M | 0.1426 | likely_benign | 0.1563 | benign | -0.411 | Destabilizing | 0.947 | D | 0.717 | prob.delet. | None | None | None | None | I |
V/N | 0.3007 | likely_benign | 0.3544 | ambiguous | -0.681 | Destabilizing | 0.991 | D | 0.849 | deleterious | None | None | None | None | I |
V/P | 0.5831 | likely_pathogenic | 0.6717 | pathogenic | -0.727 | Destabilizing | 0.991 | D | 0.829 | deleterious | None | None | None | None | I |
V/Q | 0.3484 | ambiguous | 0.3925 | ambiguous | -0.927 | Destabilizing | 0.991 | D | 0.82 | deleterious | None | None | None | None | I |
V/R | 0.3253 | likely_benign | 0.3459 | ambiguous | -0.377 | Destabilizing | 0.991 | D | 0.84 | deleterious | None | None | None | None | I |
V/S | 0.2571 | likely_benign | 0.3034 | benign | -1.118 | Destabilizing | 0.973 | D | 0.765 | deleterious | None | None | None | None | I |
V/T | 0.1655 | likely_benign | 0.181 | benign | -1.081 | Destabilizing | 0.835 | D | 0.659 | prob.neutral | None | None | None | None | I |
V/W | 0.8155 | likely_pathogenic | 0.8392 | pathogenic | -1.115 | Destabilizing | 0.998 | D | 0.834 | deleterious | None | None | None | None | I |
V/Y | 0.5405 | ambiguous | 0.5797 | pathogenic | -0.849 | Destabilizing | 0.973 | D | 0.697 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.