Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33000 | 99223;99224;99225 | chr2:178538831;178538830;178538829 | chr2:179403558;179403557;179403556 |
N2AB | 31359 | 94300;94301;94302 | chr2:178538831;178538830;178538829 | chr2:179403558;179403557;179403556 |
N2A | 30432 | 91519;91520;91521 | chr2:178538831;178538830;178538829 | chr2:179403558;179403557;179403556 |
N2B | 23935 | 72028;72029;72030 | chr2:178538831;178538830;178538829 | chr2:179403558;179403557;179403556 |
Novex-1 | 24060 | 72403;72404;72405 | chr2:178538831;178538830;178538829 | chr2:179403558;179403557;179403556 |
Novex-2 | 24127 | 72604;72605;72606 | chr2:178538831;178538830;178538829 | chr2:179403558;179403557;179403556 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.999 | D | 0.582 | 0.478 | 0.456552270603 | gnomAD-4.0.0 | 6.88325E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03122E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1519 | likely_benign | 0.1532 | benign | -0.397 | Destabilizing | 0.923 | D | 0.546 | neutral | None | None | None | None | N |
S/C | 0.2393 | likely_benign | 0.201 | benign | -0.297 | Destabilizing | 1.0 | D | 0.619 | neutral | D | 0.540149543 | None | None | N |
S/D | 0.8464 | likely_pathogenic | 0.8034 | pathogenic | -0.165 | Destabilizing | 0.992 | D | 0.57 | neutral | None | None | None | None | N |
S/E | 0.8968 | likely_pathogenic | 0.8827 | pathogenic | -0.224 | Destabilizing | 0.997 | D | 0.569 | neutral | None | None | None | None | N |
S/F | 0.6557 | likely_pathogenic | 0.6016 | pathogenic | -0.733 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
S/G | 0.136 | likely_benign | 0.1232 | benign | -0.584 | Destabilizing | 0.054 | N | 0.346 | neutral | N | 0.515580143 | None | None | N |
S/H | 0.8272 | likely_pathogenic | 0.7887 | pathogenic | -1.16 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
S/I | 0.6323 | likely_pathogenic | 0.5714 | pathogenic | -0.022 | Destabilizing | 0.999 | D | 0.67 | neutral | D | 0.539896054 | None | None | N |
S/K | 0.9717 | likely_pathogenic | 0.9598 | pathogenic | -0.707 | Destabilizing | 0.992 | D | 0.568 | neutral | None | None | None | None | N |
S/L | 0.3153 | likely_benign | 0.286 | benign | -0.022 | Destabilizing | 0.998 | D | 0.612 | neutral | None | None | None | None | N |
S/M | 0.5033 | ambiguous | 0.4868 | ambiguous | 0.234 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
S/N | 0.4781 | ambiguous | 0.4347 | ambiguous | -0.441 | Destabilizing | 0.989 | D | 0.573 | neutral | D | 0.538628606 | None | None | N |
S/P | 0.8715 | likely_pathogenic | 0.8554 | pathogenic | -0.115 | Destabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
S/Q | 0.8678 | likely_pathogenic | 0.8544 | pathogenic | -0.669 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | N |
S/R | 0.95 | likely_pathogenic | 0.9289 | pathogenic | -0.532 | Destabilizing | 0.999 | D | 0.582 | neutral | D | 0.527361206 | None | None | N |
S/T | 0.1828 | likely_benign | 0.177 | benign | -0.48 | Destabilizing | 0.989 | D | 0.523 | neutral | N | 0.500774255 | None | None | N |
S/V | 0.5561 | ambiguous | 0.5315 | ambiguous | -0.115 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
S/W | 0.8208 | likely_pathogenic | 0.7697 | pathogenic | -0.74 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
S/Y | 0.6772 | likely_pathogenic | 0.6044 | pathogenic | -0.482 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.