Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33004 | 99235;99236;99237 | chr2:178538819;178538818;178538817 | chr2:179403546;179403545;179403544 |
N2AB | 31363 | 94312;94313;94314 | chr2:178538819;178538818;178538817 | chr2:179403546;179403545;179403544 |
N2A | 30436 | 91531;91532;91533 | chr2:178538819;178538818;178538817 | chr2:179403546;179403545;179403544 |
N2B | 23939 | 72040;72041;72042 | chr2:178538819;178538818;178538817 | chr2:179403546;179403545;179403544 |
Novex-1 | 24064 | 72415;72416;72417 | chr2:178538819;178538818;178538817 | chr2:179403546;179403545;179403544 |
Novex-2 | 24131 | 72616;72617;72618 | chr2:178538819;178538818;178538817 | chr2:179403546;179403545;179403544 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.117 | N | 0.231 | 0.029 | 0.124217242631 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31253E-06 | 0 | 0 |
E/K | rs1430479262 | 0.466 | 0.977 | N | 0.588 | 0.362 | 0.340273420219 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.37E-05 | None | 0 | 0 | 0 |
E/K | rs1430479262 | 0.466 | 0.977 | N | 0.588 | 0.362 | 0.340273420219 | gnomAD-4.0.0 | 3.21006E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.90352E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2577 | likely_benign | 0.2548 | benign | -0.394 | Destabilizing | 0.977 | D | 0.652 | neutral | N | 0.446079986 | None | None | N |
E/C | 0.894 | likely_pathogenic | 0.8885 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/D | 0.0962 | likely_benign | 0.0962 | benign | -0.427 | Destabilizing | 0.117 | N | 0.231 | neutral | N | 0.432283969 | None | None | N |
E/F | 0.8132 | likely_pathogenic | 0.8101 | pathogenic | -0.177 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
E/G | 0.2797 | likely_benign | 0.2885 | benign | -0.607 | Destabilizing | 0.993 | D | 0.679 | prob.neutral | N | 0.452851243 | None | None | N |
E/H | 0.6464 | likely_pathogenic | 0.6413 | pathogenic | 0.086 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/I | 0.4785 | ambiguous | 0.4515 | ambiguous | 0.14 | Stabilizing | 0.998 | D | 0.758 | deleterious | None | None | None | None | N |
E/K | 0.2833 | likely_benign | 0.2669 | benign | 0.27 | Stabilizing | 0.977 | D | 0.588 | neutral | N | 0.445079908 | None | None | N |
E/L | 0.5478 | ambiguous | 0.5341 | ambiguous | 0.14 | Stabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/M | 0.6023 | likely_pathogenic | 0.5937 | pathogenic | 0.165 | Stabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
E/N | 0.2566 | likely_benign | 0.2572 | benign | -0.135 | Destabilizing | 0.99 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/P | 0.5853 | likely_pathogenic | 0.6118 | pathogenic | -0.018 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
E/Q | 0.242 | likely_benign | 0.2456 | benign | -0.086 | Destabilizing | 0.997 | D | 0.686 | prob.neutral | N | 0.458105134 | None | None | N |
E/R | 0.4663 | ambiguous | 0.4611 | ambiguous | 0.528 | Stabilizing | 0.998 | D | 0.706 | prob.neutral | None | None | None | None | N |
E/S | 0.2611 | likely_benign | 0.2614 | benign | -0.282 | Destabilizing | 0.983 | D | 0.625 | neutral | None | None | None | None | N |
E/T | 0.3198 | likely_benign | 0.3036 | benign | -0.105 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/V | 0.3187 | likely_benign | 0.305 | benign | -0.018 | Destabilizing | 0.997 | D | 0.746 | deleterious | N | 0.436692498 | None | None | N |
E/W | 0.943 | likely_pathogenic | 0.9488 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/Y | 0.6928 | likely_pathogenic | 0.6993 | pathogenic | 0.074 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.