Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33006 | 99241;99242;99243 | chr2:178538813;178538812;178538811 | chr2:179403540;179403539;179403538 |
N2AB | 31365 | 94318;94319;94320 | chr2:178538813;178538812;178538811 | chr2:179403540;179403539;179403538 |
N2A | 30438 | 91537;91538;91539 | chr2:178538813;178538812;178538811 | chr2:179403540;179403539;179403538 |
N2B | 23941 | 72046;72047;72048 | chr2:178538813;178538812;178538811 | chr2:179403540;179403539;179403538 |
Novex-1 | 24066 | 72421;72422;72423 | chr2:178538813;178538812;178538811 | chr2:179403540;179403539;179403538 |
Novex-2 | 24133 | 72622;72623;72624 | chr2:178538813;178538812;178538811 | chr2:179403540;179403539;179403538 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs201931674 | 0.264 | 0.978 | N | 0.503 | 0.344 | 0.269111216191 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.69E-05 | 0 |
E/K | rs201931674 | 0.264 | 0.978 | N | 0.503 | 0.344 | 0.269111216191 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs201931674 | 0.264 | 0.978 | N | 0.503 | 0.344 | 0.269111216191 | gnomAD-4.0.0 | 1.11785E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.56627E-05 | 0 | 1.44343E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2286 | likely_benign | 0.2819 | benign | -0.52 | Destabilizing | 0.989 | D | 0.587 | neutral | N | 0.492391066 | None | None | N |
E/C | 0.8561 | likely_pathogenic | 0.8864 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/D | 0.1263 | likely_benign | 0.138 | benign | -0.552 | Destabilizing | 0.054 | N | 0.193 | neutral | N | 0.49121763 | None | None | N |
E/F | 0.8194 | likely_pathogenic | 0.8661 | pathogenic | -0.046 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
E/G | 0.2432 | likely_benign | 0.3161 | benign | -0.796 | Destabilizing | 0.978 | D | 0.633 | neutral | N | 0.480763307 | None | None | N |
E/H | 0.4855 | ambiguous | 0.5258 | ambiguous | 0.09 | Stabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
E/I | 0.4899 | ambiguous | 0.5447 | ambiguous | 0.201 | Stabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
E/K | 0.2303 | likely_benign | 0.2686 | benign | 0.011 | Stabilizing | 0.978 | D | 0.503 | neutral | N | 0.431955895 | None | None | N |
E/L | 0.5227 | ambiguous | 0.5892 | pathogenic | 0.201 | Stabilizing | 0.998 | D | 0.782 | deleterious | None | None | None | None | N |
E/M | 0.5782 | likely_pathogenic | 0.6437 | pathogenic | 0.249 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/N | 0.2433 | likely_benign | 0.2879 | benign | -0.504 | Destabilizing | 0.983 | D | 0.545 | neutral | None | None | None | None | N |
E/P | 0.9377 | likely_pathogenic | 0.9592 | pathogenic | -0.018 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/Q | 0.1626 | likely_benign | 0.18 | benign | -0.411 | Destabilizing | 0.989 | D | 0.545 | neutral | N | 0.442962323 | None | None | N |
E/R | 0.3519 | ambiguous | 0.3953 | ambiguous | 0.349 | Stabilizing | 0.998 | D | 0.594 | neutral | None | None | None | None | N |
E/S | 0.2261 | likely_benign | 0.2739 | benign | -0.69 | Destabilizing | 0.983 | D | 0.495 | neutral | None | None | None | None | N |
E/T | 0.2507 | likely_benign | 0.2943 | benign | -0.46 | Destabilizing | 0.992 | D | 0.664 | neutral | None | None | None | None | N |
E/V | 0.2939 | likely_benign | 0.3395 | benign | -0.018 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | N | 0.487907966 | None | None | N |
E/W | 0.9279 | likely_pathogenic | 0.9481 | pathogenic | 0.203 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
E/Y | 0.7017 | likely_pathogenic | 0.7654 | pathogenic | 0.212 | Stabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.