Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33010 | 99253;99254;99255 | chr2:178538801;178538800;178538799 | chr2:179403528;179403527;179403526 |
N2AB | 31369 | 94330;94331;94332 | chr2:178538801;178538800;178538799 | chr2:179403528;179403527;179403526 |
N2A | 30442 | 91549;91550;91551 | chr2:178538801;178538800;178538799 | chr2:179403528;179403527;179403526 |
N2B | 23945 | 72058;72059;72060 | chr2:178538801;178538800;178538799 | chr2:179403528;179403527;179403526 |
Novex-1 | 24070 | 72433;72434;72435 | chr2:178538801;178538800;178538799 | chr2:179403528;179403527;179403526 |
Novex-2 | 24137 | 72634;72635;72636 | chr2:178538801;178538800;178538799 | chr2:179403528;179403527;179403526 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.324 | N | 0.379 | 0.308 | 0.587297536726 | gnomAD-4.0.0 | 1.59692E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86854E-06 | 0 | 0 |
I/V | rs1419804652 | None | None | N | 0.083 | 0.052 | 0.28058544554 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs1419804652 | None | None | N | 0.083 | 0.052 | 0.28058544554 | gnomAD-4.0.0 | 2.02987E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20493E-06 | 4.69616E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.312 | likely_benign | 0.4083 | ambiguous | -1.027 | Destabilizing | 0.116 | N | 0.418 | neutral | None | None | None | None | I |
I/C | 0.6225 | likely_pathogenic | 0.7054 | pathogenic | -1.033 | Destabilizing | 0.981 | D | 0.321 | neutral | None | None | None | None | I |
I/D | 0.7753 | likely_pathogenic | 0.8844 | pathogenic | 0.123 | Stabilizing | 0.932 | D | 0.489 | neutral | None | None | None | None | I |
I/E | 0.6547 | likely_pathogenic | 0.7813 | pathogenic | 0.096 | Stabilizing | 0.818 | D | 0.467 | neutral | None | None | None | None | I |
I/F | 0.1839 | likely_benign | 0.2664 | benign | -0.888 | Destabilizing | 0.527 | D | 0.363 | neutral | None | None | None | None | I |
I/G | 0.6784 | likely_pathogenic | 0.8035 | pathogenic | -1.263 | Destabilizing | 0.818 | D | 0.454 | neutral | None | None | None | None | I |
I/H | 0.5693 | likely_pathogenic | 0.7163 | pathogenic | -0.662 | Destabilizing | 0.981 | D | 0.451 | neutral | None | None | None | None | I |
I/K | 0.5084 | ambiguous | 0.6373 | pathogenic | -0.43 | Destabilizing | 0.773 | D | 0.459 | neutral | N | 0.499493183 | None | None | I |
I/L | 0.1 | likely_benign | 0.1547 | benign | -0.489 | Destabilizing | 0.001 | N | 0.06 | neutral | N | 0.478424478 | None | None | I |
I/M | 0.119 | likely_benign | 0.1542 | benign | -0.542 | Destabilizing | 0.627 | D | 0.405 | neutral | N | 0.48126074 | None | None | I |
I/N | 0.3404 | ambiguous | 0.502 | ambiguous | -0.25 | Destabilizing | 0.932 | D | 0.485 | neutral | None | None | None | None | I |
I/P | 0.8624 | likely_pathogenic | 0.9216 | pathogenic | -0.636 | Destabilizing | 0.932 | D | 0.491 | neutral | None | None | None | None | I |
I/Q | 0.4989 | ambiguous | 0.6415 | pathogenic | -0.406 | Destabilizing | 0.932 | D | 0.465 | neutral | None | None | None | None | I |
I/R | 0.4069 | ambiguous | 0.5534 | ambiguous | -0.064 | Destabilizing | 0.773 | D | 0.485 | neutral | N | 0.48396637 | None | None | I |
I/S | 0.3244 | likely_benign | 0.4305 | ambiguous | -0.927 | Destabilizing | 0.69 | D | 0.421 | neutral | None | None | None | None | I |
I/T | 0.2221 | likely_benign | 0.2747 | benign | -0.833 | Destabilizing | 0.324 | N | 0.379 | neutral | N | 0.473922735 | None | None | I |
I/V | 0.0657 | likely_benign | 0.0635 | benign | -0.636 | Destabilizing | None | N | 0.083 | neutral | N | 0.37804684 | None | None | I |
I/W | 0.818 | likely_pathogenic | 0.9122 | pathogenic | -0.882 | Destabilizing | 0.981 | D | 0.594 | neutral | None | None | None | None | I |
I/Y | 0.5468 | ambiguous | 0.6837 | pathogenic | -0.598 | Destabilizing | 0.818 | D | 0.361 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.