Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33012 | 99259;99260;99261 | chr2:178538795;178538794;178538793 | chr2:179403522;179403521;179403520 |
N2AB | 31371 | 94336;94337;94338 | chr2:178538795;178538794;178538793 | chr2:179403522;179403521;179403520 |
N2A | 30444 | 91555;91556;91557 | chr2:178538795;178538794;178538793 | chr2:179403522;179403521;179403520 |
N2B | 23947 | 72064;72065;72066 | chr2:178538795;178538794;178538793 | chr2:179403522;179403521;179403520 |
Novex-1 | 24072 | 72439;72440;72441 | chr2:178538795;178538794;178538793 | chr2:179403522;179403521;179403520 |
Novex-2 | 24139 | 72640;72641;72642 | chr2:178538795;178538794;178538793 | chr2:179403522;179403521;179403520 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs771511344 | -0.724 | 0.716 | N | 0.495 | 0.228 | 0.289098819767 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
K/E | rs771511344 | -0.724 | 0.716 | N | 0.495 | 0.228 | 0.289098819767 | gnomAD-4.0.0 | 3.42439E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.50064E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5655 | likely_pathogenic | 0.5915 | pathogenic | -0.444 | Destabilizing | 0.87 | D | 0.56 | neutral | None | None | None | None | N |
K/C | 0.8666 | likely_pathogenic | 0.8889 | pathogenic | -0.63 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
K/D | 0.8102 | likely_pathogenic | 0.8392 | pathogenic | -0.304 | Destabilizing | 0.959 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/E | 0.3953 | ambiguous | 0.4437 | ambiguous | -0.275 | Destabilizing | 0.716 | D | 0.495 | neutral | N | 0.46131601 | None | None | N |
K/F | 0.9645 | likely_pathogenic | 0.9694 | pathogenic | -0.733 | Destabilizing | 0.994 | D | 0.749 | deleterious | None | None | None | None | N |
K/G | 0.5499 | ambiguous | 0.6333 | pathogenic | -0.69 | Destabilizing | 0.959 | D | 0.651 | neutral | None | None | None | None | N |
K/H | 0.5808 | likely_pathogenic | 0.6291 | pathogenic | -1.182 | Destabilizing | 0.994 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/I | 0.7906 | likely_pathogenic | 0.81 | pathogenic | 0.145 | Stabilizing | 0.973 | D | 0.774 | deleterious | N | 0.482827222 | None | None | N |
K/L | 0.755 | likely_pathogenic | 0.7611 | pathogenic | 0.145 | Stabilizing | 0.959 | D | 0.651 | neutral | None | None | None | None | N |
K/M | 0.638 | likely_pathogenic | 0.6626 | pathogenic | 0.298 | Stabilizing | 0.998 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/N | 0.7133 | likely_pathogenic | 0.731 | pathogenic | -0.202 | Destabilizing | 0.946 | D | 0.695 | prob.neutral | N | 0.462606876 | None | None | N |
K/P | 0.7061 | likely_pathogenic | 0.7416 | pathogenic | -0.023 | Destabilizing | 0.979 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/Q | 0.2791 | likely_benign | 0.297 | benign | -0.532 | Destabilizing | 0.946 | D | 0.694 | prob.neutral | N | 0.508013879 | None | None | N |
K/R | 0.0833 | likely_benign | 0.0855 | benign | -0.258 | Destabilizing | 0.035 | N | 0.298 | neutral | N | 0.48188607 | None | None | N |
K/S | 0.6323 | likely_pathogenic | 0.6637 | pathogenic | -0.832 | Destabilizing | 0.87 | D | 0.603 | neutral | None | None | None | None | N |
K/T | 0.4718 | ambiguous | 0.4966 | ambiguous | -0.639 | Destabilizing | 0.946 | D | 0.678 | prob.neutral | N | 0.504202783 | None | None | N |
K/V | 0.7289 | likely_pathogenic | 0.7342 | pathogenic | -0.023 | Destabilizing | 0.959 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/W | 0.9044 | likely_pathogenic | 0.9401 | pathogenic | -0.613 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
K/Y | 0.8834 | likely_pathogenic | 0.9149 | pathogenic | -0.217 | Destabilizing | 0.979 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.