Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33017 | 99274;99275;99276 | chr2:178538780;178538779;178538778 | chr2:179403507;179403506;179403505 |
N2AB | 31376 | 94351;94352;94353 | chr2:178538780;178538779;178538778 | chr2:179403507;179403506;179403505 |
N2A | 30449 | 91570;91571;91572 | chr2:178538780;178538779;178538778 | chr2:179403507;179403506;179403505 |
N2B | 23952 | 72079;72080;72081 | chr2:178538780;178538779;178538778 | chr2:179403507;179403506;179403505 |
Novex-1 | 24077 | 72454;72455;72456 | chr2:178538780;178538779;178538778 | chr2:179403507;179403506;179403505 |
Novex-2 | 24144 | 72655;72656;72657 | chr2:178538780;178538779;178538778 | chr2:179403507;179403506;179403505 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | rs1300155629 | -2.332 | 0.997 | D | 0.874 | 0.672 | 0.857699135556 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
L/Q | rs1300155629 | -2.332 | 0.997 | D | 0.874 | 0.672 | 0.857699135556 | gnomAD-4.0.0 | 4.77487E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.29984E-05 | 0 |
L/R | None | None | 0.997 | D | 0.857 | 0.713 | 0.870081891428 | gnomAD-4.0.0 | 1.59162E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77316E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8994 | likely_pathogenic | 0.9043 | pathogenic | -2.733 | Highly Destabilizing | 0.953 | D | 0.685 | prob.neutral | None | None | None | None | N |
L/C | 0.8667 | likely_pathogenic | 0.8733 | pathogenic | -1.73 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/D | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -3.531 | Highly Destabilizing | 0.998 | D | 0.891 | deleterious | None | None | None | None | N |
L/E | 0.9942 | likely_pathogenic | 0.9951 | pathogenic | -3.208 | Highly Destabilizing | 0.998 | D | 0.888 | deleterious | None | None | None | None | N |
L/F | 0.3577 | ambiguous | 0.4416 | ambiguous | -1.724 | Destabilizing | 0.986 | D | 0.668 | neutral | None | None | None | None | N |
L/G | 0.9877 | likely_pathogenic | 0.9902 | pathogenic | -3.315 | Highly Destabilizing | 0.998 | D | 0.883 | deleterious | None | None | None | None | N |
L/H | 0.9817 | likely_pathogenic | 0.9854 | pathogenic | -3.103 | Highly Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
L/I | 0.0902 | likely_benign | 0.0939 | benign | -0.966 | Destabilizing | 0.02 | N | 0.253 | neutral | N | 0.508366169 | None | None | N |
L/K | 0.9912 | likely_pathogenic | 0.9923 | pathogenic | -2.251 | Highly Destabilizing | 0.993 | D | 0.847 | deleterious | None | None | None | None | N |
L/M | 0.1769 | likely_benign | 0.2012 | benign | -1.053 | Destabilizing | 0.986 | D | 0.629 | neutral | None | None | None | None | N |
L/N | 0.9953 | likely_pathogenic | 0.9961 | pathogenic | -3.041 | Highly Destabilizing | 0.998 | D | 0.895 | deleterious | None | None | None | None | N |
L/P | 0.9965 | likely_pathogenic | 0.9975 | pathogenic | -1.549 | Destabilizing | 0.997 | D | 0.897 | deleterious | D | 0.538231121 | None | None | N |
L/Q | 0.9737 | likely_pathogenic | 0.9782 | pathogenic | -2.648 | Highly Destabilizing | 0.997 | D | 0.874 | deleterious | D | 0.560943732 | None | None | N |
L/R | 0.9824 | likely_pathogenic | 0.9856 | pathogenic | -2.355 | Highly Destabilizing | 0.997 | D | 0.857 | deleterious | D | 0.560943732 | None | None | N |
L/S | 0.9838 | likely_pathogenic | 0.986 | pathogenic | -3.471 | Highly Destabilizing | 0.993 | D | 0.818 | deleterious | None | None | None | None | N |
L/T | 0.9348 | likely_pathogenic | 0.9372 | pathogenic | -2.99 | Highly Destabilizing | 0.986 | D | 0.737 | prob.delet. | None | None | None | None | N |
L/V | 0.1243 | likely_benign | 0.1305 | benign | -1.549 | Destabilizing | 0.76 | D | 0.425 | neutral | N | 0.50693923 | None | None | N |
L/W | 0.9187 | likely_pathogenic | 0.9453 | pathogenic | -2.113 | Highly Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
L/Y | 0.9304 | likely_pathogenic | 0.9489 | pathogenic | -1.929 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.