Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33021 | 99286;99287;99288 | chr2:178538768;178538767;178538766 | chr2:179403495;179403494;179403493 |
N2AB | 31380 | 94363;94364;94365 | chr2:178538768;178538767;178538766 | chr2:179403495;179403494;179403493 |
N2A | 30453 | 91582;91583;91584 | chr2:178538768;178538767;178538766 | chr2:179403495;179403494;179403493 |
N2B | 23956 | 72091;72092;72093 | chr2:178538768;178538767;178538766 | chr2:179403495;179403494;179403493 |
Novex-1 | 24081 | 72466;72467;72468 | chr2:178538768;178538767;178538766 | chr2:179403495;179403494;179403493 |
Novex-2 | 24148 | 72667;72668;72669 | chr2:178538768;178538767;178538766 | chr2:179403495;179403494;179403493 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs749757136 | -0.195 | 0.011 | N | 0.251 | 0.104 | 0.253205268125 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
K/R | rs749757136 | -0.195 | 0.011 | N | 0.251 | 0.104 | 0.253205268125 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs749757136 | -0.195 | 0.011 | N | 0.251 | 0.104 | 0.253205268125 | gnomAD-4.0.0 | 2.54085E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.47535E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2945 | likely_benign | 0.3348 | benign | -0.097 | Destabilizing | 0.919 | D | 0.625 | neutral | None | None | None | None | N |
K/C | 0.6691 | likely_pathogenic | 0.702 | pathogenic | -0.415 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
K/D | 0.5778 | likely_pathogenic | 0.6259 | pathogenic | -0.089 | Destabilizing | 0.988 | D | 0.644 | neutral | None | None | None | None | N |
K/E | 0.2241 | likely_benign | 0.2399 | benign | -0.022 | Destabilizing | 0.896 | D | 0.631 | neutral | N | 0.48981212 | None | None | N |
K/F | 0.7496 | likely_pathogenic | 0.7864 | pathogenic | -0.088 | Destabilizing | 0.996 | D | 0.74 | deleterious | None | None | None | None | N |
K/G | 0.407 | ambiguous | 0.4689 | ambiguous | -0.362 | Destabilizing | 0.959 | D | 0.596 | neutral | None | None | None | None | N |
K/H | 0.336 | likely_benign | 0.3771 | ambiguous | -0.557 | Destabilizing | 0.988 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/I | 0.3451 | ambiguous | 0.3621 | ambiguous | 0.545 | Stabilizing | 0.984 | D | 0.737 | prob.delet. | N | 0.489143871 | None | None | N |
K/L | 0.3266 | likely_benign | 0.3637 | ambiguous | 0.545 | Stabilizing | 0.919 | D | 0.596 | neutral | None | None | None | None | N |
K/M | 0.223 | likely_benign | 0.2485 | benign | 0.071 | Stabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/N | 0.3961 | ambiguous | 0.4443 | ambiguous | -0.127 | Destabilizing | 0.896 | D | 0.572 | neutral | N | 0.473027853 | None | None | N |
K/P | 0.3995 | ambiguous | 0.4528 | ambiguous | 0.36 | Stabilizing | 0.996 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/Q | 0.1408 | likely_benign | 0.1601 | benign | -0.156 | Destabilizing | 0.896 | D | 0.597 | neutral | N | 0.501895983 | None | None | N |
K/R | 0.0879 | likely_benign | 0.0932 | benign | -0.229 | Destabilizing | 0.011 | N | 0.251 | neutral | N | 0.44454119 | None | None | N |
K/S | 0.3949 | ambiguous | 0.445 | ambiguous | -0.573 | Destabilizing | 0.919 | D | 0.563 | neutral | None | None | None | None | N |
K/T | 0.2006 | likely_benign | 0.223 | benign | -0.33 | Destabilizing | 0.946 | D | 0.622 | neutral | N | 0.469469454 | None | None | N |
K/V | 0.3301 | likely_benign | 0.356 | ambiguous | 0.36 | Stabilizing | 0.988 | D | 0.637 | neutral | None | None | None | None | N |
K/W | 0.7528 | likely_pathogenic | 0.7977 | pathogenic | -0.134 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
K/Y | 0.5977 | likely_pathogenic | 0.6279 | pathogenic | 0.202 | Stabilizing | 0.996 | D | 0.728 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.