Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33029 | 99310;99311;99312 | chr2:178538744;178538743;178538742 | chr2:179403471;179403470;179403469 |
N2AB | 31388 | 94387;94388;94389 | chr2:178538744;178538743;178538742 | chr2:179403471;179403470;179403469 |
N2A | 30461 | 91606;91607;91608 | chr2:178538744;178538743;178538742 | chr2:179403471;179403470;179403469 |
N2B | 23964 | 72115;72116;72117 | chr2:178538744;178538743;178538742 | chr2:179403471;179403470;179403469 |
Novex-1 | 24089 | 72490;72491;72492 | chr2:178538744;178538743;178538742 | chr2:179403471;179403470;179403469 |
Novex-2 | 24156 | 72691;72692;72693 | chr2:178538744;178538743;178538742 | chr2:179403471;179403470;179403469 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1431873084 | 0.142 | 0.645 | N | 0.526 | 0.304 | 0.230578612272 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1431873084 | 0.142 | 0.645 | N | 0.526 | 0.304 | 0.230578612272 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 0 | 2.28645E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1371 | likely_benign | 0.1512 | benign | -0.393 | Destabilizing | 0.645 | D | 0.569 | neutral | N | 0.455702334 | None | None | N |
E/C | 0.7731 | likely_pathogenic | 0.8027 | pathogenic | -0.249 | Destabilizing | 0.995 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/D | 0.0663 | likely_benign | 0.0727 | benign | -0.398 | Destabilizing | 0.002 | N | 0.162 | neutral | N | 0.483464938 | None | None | N |
E/F | 0.7784 | likely_pathogenic | 0.8103 | pathogenic | -0.099 | Destabilizing | 0.995 | D | 0.661 | neutral | None | None | None | None | N |
E/G | 0.1554 | likely_benign | 0.1704 | benign | -0.626 | Destabilizing | 0.645 | D | 0.535 | neutral | N | 0.487545393 | None | None | N |
E/H | 0.4967 | ambiguous | 0.519 | ambiguous | 0.134 | Stabilizing | 0.985 | D | 0.591 | neutral | None | None | None | None | N |
E/I | 0.393 | ambiguous | 0.4304 | ambiguous | 0.197 | Stabilizing | 0.945 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/K | 0.2147 | likely_benign | 0.209 | benign | 0.099 | Stabilizing | 0.645 | D | 0.526 | neutral | N | 0.444138546 | None | None | N |
E/L | 0.4061 | ambiguous | 0.4532 | ambiguous | 0.197 | Stabilizing | 0.945 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/M | 0.4741 | ambiguous | 0.5232 | ambiguous | 0.187 | Stabilizing | 0.995 | D | 0.633 | neutral | None | None | None | None | N |
E/N | 0.1604 | likely_benign | 0.1742 | benign | -0.265 | Destabilizing | 0.809 | D | 0.555 | neutral | None | None | None | None | N |
E/P | 0.2493 | likely_benign | 0.2824 | benign | 0.021 | Stabilizing | 0.945 | D | 0.619 | neutral | None | None | None | None | N |
E/Q | 0.1773 | likely_benign | 0.1861 | benign | -0.198 | Destabilizing | 0.864 | D | 0.541 | neutral | N | 0.498703749 | None | None | N |
E/R | 0.3348 | likely_benign | 0.3368 | benign | 0.41 | Stabilizing | 0.894 | D | 0.617 | neutral | None | None | None | None | N |
E/S | 0.1679 | likely_benign | 0.1856 | benign | -0.452 | Destabilizing | 0.547 | D | 0.527 | neutral | None | None | None | None | N |
E/T | 0.2076 | likely_benign | 0.2328 | benign | -0.262 | Destabilizing | 0.894 | D | 0.557 | neutral | None | None | None | None | N |
E/V | 0.2228 | likely_benign | 0.2433 | benign | 0.021 | Stabilizing | 0.928 | D | 0.643 | neutral | N | 0.50776595 | None | None | N |
E/W | 0.8971 | likely_pathogenic | 0.9147 | pathogenic | 0.084 | Stabilizing | 0.995 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/Y | 0.5849 | likely_pathogenic | 0.6188 | pathogenic | 0.143 | Stabilizing | 0.995 | D | 0.639 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.