Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33037 | 99334;99335;99336 | chr2:178538720;178538719;178538718 | chr2:179403447;179403446;179403445 |
N2AB | 31396 | 94411;94412;94413 | chr2:178538720;178538719;178538718 | chr2:179403447;179403446;179403445 |
N2A | 30469 | 91630;91631;91632 | chr2:178538720;178538719;178538718 | chr2:179403447;179403446;179403445 |
N2B | 23972 | 72139;72140;72141 | chr2:178538720;178538719;178538718 | chr2:179403447;179403446;179403445 |
Novex-1 | 24097 | 72514;72515;72516 | chr2:178538720;178538719;178538718 | chr2:179403447;179403446;179403445 |
Novex-2 | 24164 | 72715;72716;72717 | chr2:178538720;178538719;178538718 | chr2:179403447;179403446;179403445 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1692914816 | None | 1.0 | N | 0.725 | 0.401 | 0.608945918356 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 2.88018E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs1692914816 | None | 1.0 | N | 0.725 | 0.401 | 0.608945918356 | gnomAD-4.0.0 | 3.09847E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.68908E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/H | None | None | 0.999 | N | 0.682 | 0.399 | 0.532216101619 | gnomAD-4.0.0 | 3.18263E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71687E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8147 | likely_pathogenic | 0.8352 | pathogenic | -2.053 | Highly Destabilizing | 0.992 | D | 0.667 | neutral | None | None | None | None | N |
Y/C | 0.2061 | likely_benign | 0.2346 | benign | -1.058 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.495802304 | None | None | N |
Y/D | 0.9189 | likely_pathogenic | 0.9263 | pathogenic | -2.696 | Highly Destabilizing | 0.999 | D | 0.756 | deleterious | N | 0.518210628 | None | None | N |
Y/E | 0.9375 | likely_pathogenic | 0.9449 | pathogenic | -2.468 | Highly Destabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | N |
Y/F | 0.1156 | likely_benign | 0.1199 | benign | -0.592 | Destabilizing | 0.121 | N | 0.275 | neutral | N | 0.475928464 | None | None | N |
Y/G | 0.7973 | likely_pathogenic | 0.8051 | pathogenic | -2.468 | Highly Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
Y/H | 0.3444 | ambiguous | 0.3807 | ambiguous | -1.504 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | N | 0.480102787 | None | None | N |
Y/I | 0.674 | likely_pathogenic | 0.7269 | pathogenic | -0.691 | Destabilizing | 0.995 | D | 0.647 | neutral | None | None | None | None | N |
Y/K | 0.8591 | likely_pathogenic | 0.8639 | pathogenic | -1.668 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
Y/L | 0.6502 | likely_pathogenic | 0.6893 | pathogenic | -0.691 | Destabilizing | 0.967 | D | 0.637 | neutral | None | None | None | None | N |
Y/M | 0.7127 | likely_pathogenic | 0.7475 | pathogenic | -0.538 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
Y/N | 0.588 | likely_pathogenic | 0.6241 | pathogenic | -2.577 | Highly Destabilizing | 0.999 | D | 0.735 | prob.delet. | N | 0.518210628 | None | None | N |
Y/P | 0.9977 | likely_pathogenic | 0.9982 | pathogenic | -1.157 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
Y/Q | 0.7767 | likely_pathogenic | 0.7987 | pathogenic | -2.19 | Highly Destabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | N |
Y/R | 0.7655 | likely_pathogenic | 0.7582 | pathogenic | -1.844 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
Y/S | 0.5808 | likely_pathogenic | 0.6068 | pathogenic | -2.852 | Highly Destabilizing | 0.999 | D | 0.716 | prob.delet. | N | 0.518641878 | None | None | N |
Y/T | 0.7772 | likely_pathogenic | 0.805 | pathogenic | -2.491 | Highly Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
Y/V | 0.5694 | likely_pathogenic | 0.6243 | pathogenic | -1.157 | Destabilizing | 0.983 | D | 0.641 | neutral | None | None | None | None | N |
Y/W | 0.5433 | ambiguous | 0.5875 | pathogenic | -0.007 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.