Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33042 | 99349;99350;99351 | chr2:178538705;178538704;178538703 | chr2:179403432;179403431;179403430 |
N2AB | 31401 | 94426;94427;94428 | chr2:178538705;178538704;178538703 | chr2:179403432;179403431;179403430 |
N2A | 30474 | 91645;91646;91647 | chr2:178538705;178538704;178538703 | chr2:179403432;179403431;179403430 |
N2B | 23977 | 72154;72155;72156 | chr2:178538705;178538704;178538703 | chr2:179403432;179403431;179403430 |
Novex-1 | 24102 | 72529;72530;72531 | chr2:178538705;178538704;178538703 | chr2:179403432;179403431;179403430 |
Novex-2 | 24169 | 72730;72731;72732 | chr2:178538705;178538704;178538703 | chr2:179403432;179403431;179403430 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.982 | N | 0.482 | 0.254 | 0.307966526162 | gnomAD-4.0.0 | 4.77398E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57545E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2021 | likely_benign | 0.2399 | benign | -0.421 | Destabilizing | 0.939 | D | 0.415 | neutral | N | 0.460662649 | None | None | N |
D/C | 0.6178 | likely_pathogenic | 0.6846 | pathogenic | 0.054 | Stabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
D/E | 0.0973 | likely_benign | 0.1061 | benign | -0.445 | Destabilizing | 0.02 | N | 0.247 | neutral | N | 0.425163209 | None | None | N |
D/F | 0.5766 | likely_pathogenic | 0.6668 | pathogenic | -0.382 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/G | 0.2139 | likely_benign | 0.258 | benign | -0.644 | Destabilizing | 0.939 | D | 0.411 | neutral | N | 0.439977946 | None | None | N |
D/H | 0.4182 | ambiguous | 0.4683 | ambiguous | -0.442 | Destabilizing | 0.998 | D | 0.559 | neutral | N | 0.468282055 | None | None | N |
D/I | 0.3536 | ambiguous | 0.4315 | ambiguous | 0.128 | Stabilizing | 0.993 | D | 0.658 | neutral | None | None | None | None | N |
D/K | 0.4432 | ambiguous | 0.4913 | ambiguous | 0.167 | Stabilizing | 0.91 | D | 0.409 | neutral | None | None | None | None | N |
D/L | 0.3919 | ambiguous | 0.4591 | ambiguous | 0.128 | Stabilizing | 0.986 | D | 0.617 | neutral | None | None | None | None | N |
D/M | 0.5528 | ambiguous | 0.63 | pathogenic | 0.438 | Stabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
D/N | 0.1236 | likely_benign | 0.1466 | benign | -0.107 | Destabilizing | 0.982 | D | 0.482 | neutral | N | 0.465817753 | None | None | N |
D/P | 0.8389 | likely_pathogenic | 0.8729 | pathogenic | -0.033 | Destabilizing | 0.993 | D | 0.5 | neutral | None | None | None | None | N |
D/Q | 0.3441 | ambiguous | 0.3824 | ambiguous | -0.079 | Destabilizing | 0.973 | D | 0.488 | neutral | None | None | None | None | N |
D/R | 0.5553 | ambiguous | 0.5975 | pathogenic | 0.266 | Stabilizing | 0.986 | D | 0.529 | neutral | None | None | None | None | N |
D/S | 0.1475 | likely_benign | 0.1698 | benign | -0.241 | Destabilizing | 0.953 | D | 0.373 | neutral | None | None | None | None | N |
D/T | 0.2582 | likely_benign | 0.2966 | benign | -0.067 | Destabilizing | 0.986 | D | 0.487 | neutral | None | None | None | None | N |
D/V | 0.2322 | likely_benign | 0.2836 | benign | -0.033 | Destabilizing | 0.991 | D | 0.623 | neutral | N | 0.464492388 | None | None | N |
D/W | 0.8974 | likely_pathogenic | 0.9224 | pathogenic | -0.241 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | N |
D/Y | 0.2992 | likely_benign | 0.3655 | ambiguous | -0.143 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.503818781 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.